Gm48103 Pseudogene Detail

Summary

• Symbol
  Gm48103
• Name
  predicted gene, 48103

• Feature Type
  pseudogene
• IDs
  MGI:6097453
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:65543821-65543952 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  21 from dbSNP Build 142
• Strain Annotations
  45

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097453	pseudogene	Chr13:65543821-65543952 (-)
129S1/SvImJ	ENSMUSG00200013743	pseudogene	Chr13:61655296-61655427 (-)
A/J	ENSMUSG00195031516	pseudogene	Chr13:61807729-61807859 (-)
AKR/J	ENSMUSG00220037496	pseudogene	Chr13:60900274-60900405 (-)
BALB/cJ	ENSMUSG00180028713	pseudogene	Chr13:62216402-62216533 (-)
BALB/cJ	ENSMUSG00180030337	pseudogene	Chr13:62492622-62492753 (-)
BALB/cJ	ENSMUSG00180030292	pseudogene	Chr13:62298616-62298742 (+)
BALB/cJ	ENSMUSG00180030266	pseudogene	Chr13:62118706-62118832 (-)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215011923	pseudogene	Chr13:62036716-62036847 (-)
C57BL/6NJ	ENSMUSG00215020680	pseudogene	Chr13:62523231-62523362 (-)
C57BL/6NJ	ENSMUSG00215020393	pseudogene	Chr13:62224915-62225046 (-)
C57BL/6NJ	ENSMUSG00215020620	pseudogene	Chr13:62462355-62462481 (-)
C57BL/6NJ	ENSMUSG00215020578	pseudogene	Chr13:62326614-62326740 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012310	pseudogene	Chr13:62375682-62375808 (+)
CAST/EiJ	ENSTCUG00005012320	pseudogene	Chr13:62544594-62544725 (-)
CAST/EiJ	ENSTCUG00005012314	pseudogene	Chr13:62420597-62420723 (+)
CAST/EiJ	ENSTCUG00005012290	pseudogene	Chr13:62294873-62295004 (-)
CBA/J	ENSMUSG00210009828	pseudogene	Chr13:62126331-62126462 (-)
DBA/2J	ENSMUSG00185010028	pseudogene	Chr13:62976760-62976891 (-)
DBA/2J	ENSMUSG00185010369	pseudogene	Chr13:63589816-63589947 (+)
DBA/2J	ENSMUSG00185010251	pseudogene	Chr13:63046267-63046393 (-)
DBA/2J	ENSMUSG00185010295	pseudogene	Chr13:63140661-63140792 (-)
DBA/2J	ENSMUSG00185010313	pseudogene	Chr13:63219911-63220037 (-)
DBA/2J	ENSMUSG00185010358	pseudogene	Chr13:63542501-63542627 (+)
DBA/2J	ENSMUSG00185010396	pseudogene	Chr13:63746560-63746686 (-)
DBA/2J	ENSMUSG00185010030	pseudogene	Chr13:63813200-63813331 (-)
DBA/2J	ENSMUSG00185010449	pseudogene	Chr13:64121010-64121141 (-)
DBA/2J	ENSMUSG00185010713	pseudogene	Chr13:65436802-65436928 (+)
DBA/2J	ENSMUSG00185010804	pseudogene	Chr13:65821902-65822028 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000035361	pseudogene	Chr13:62614297-62614428 (-)
JF1/MsJ	ENSUMUG00000043427	pseudogene	Chr13:63343547-63343673 (+)
JF1/MsJ	ENSUMUG00000043138	pseudogene	Chr13:63020822-63020948 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190040042	pseudogene	Chr13:61902673-61902803 (-)
NZO/HlLtJ	ENSMUSG00225048942	pseudogene	Chr13:68197580-68197711 (-)
NZO/HlLtJ	ENSMUSG00225048908	pseudogene	Chr13:68003154-68003280 (+)
NZO/HlLtJ	ENSMUSG00225048649	pseudogene	Chr13:66175190-66175316 (-)
NZO/HlLtJ	ENSMUSG00225048765	pseudogene	Chr13:66823113-66823239 (+)
NZO/HlLtJ	ENSMUSG00225048721	pseudogene	Chr13:66623871-66624002 (-)
NZO/HlLtJ	ENSMUSG00225048947	pseudogene	Chr13:68233214-68233345 (-)
NZO/HlLtJ	ENSMUSG00225048899	pseudogene	Chr13:67848220-67848351 (+)
NZO/HlLtJ	ENSMUSG00225048881	pseudogene	Chr13:67680111-67680237 (+)
NZO/HlLtJ	ENSMUSG00225048820	pseudogene	Chr13:66983023-66983154 (+)
NZO/HlLtJ	ENSMUSG00225048798	pseudogene	Chr13:66930774-66930905 (+)
NZO/HlLtJ	ENSMUSG00225048157	pseudogene	Chr13:66232221-66232352 (-)
PWK/PhJ	ENSLUMG00010011842	pseudogene	Chr13:61435186-61435383 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm48103
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  47

• Ensembl
  ENSMUSG00000113301 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113301	Ensembl Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	ENSMUST00000221922	Ensembl | MGI Sequence Detail	132	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;