Gm47985 Gene Detail

Summary

• Symbol
  Gm47985
• Name
  predicted gene, 47985

• Feature Type
  protein coding gene
• IDs
  MGI:6097275
  NCBI Gene: 118567800
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:151058288-151059994 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097275	protein coding gene	Chr1:151058262-151060007 (+)
129S1/SvImJ	ENSMUSG00200002547	protein coding gene	Chr1:148521224-148522928 (+)
A/J	ENSMUSG00195013349	protein coding gene	Chr1:147869973-147871677 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180031814	protein coding gene	Chr1:148075797-148077503 (+)
C3H/HeJ	ENSMUSG00175002577	protein coding gene	Chr1:148151682-148153386 (+)
C57BL/6NJ	ENSMUSG00215003319	protein coding gene	Chr1:148017930-148019636 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185041264	protein coding gene	Chr1:152290524-152292230 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000010267	protein coding gene	Chr1:151458161-151459867 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190012065	protein coding gene	Chr1:147867213-147868917 (+)
NZO/HlLtJ	ENSMUSG00225005312	protein coding gene	Chr1:155562691-155564395 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005022360	protein coding gene	Chr1:147473598-147475299 (+)

Homology

• MGI Vertebrate Homology
  Gm47985 stringent orthology
  1 mouse;1 rat
  
• Gene Tree
  Gm47985
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000114212 (Evidence)
• NCBI Gene
  118567800

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114212	Ensembl Gene Model | MGI Sequence Detail	1707	C57BL/6J
transcript	ENSMUST00000225278	Ensembl | MGI Sequence Detail	1707	Not Applicable
polypeptide	ENSMUSP00000152996	Ensembl | MGI Sequence Detail	300	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 4
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;