Gm47980 Gene Detail

Summary

• Symbol
  Gm47980
• Name
  predicted gene, 47980

• Feature Type
  unclassified gene
• IDs
  MGI:6097267
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:108926838-108929758 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097267	unclassified gene	Chr12:108926838-108929758 (+)
129S1/SvImJ	ENSMUSG00200028755	unclassified gene	Chr12:100700177-100703097 (+)
A/J	ENSMUSG00195045645	unclassified gene	Chr12:103260933-103263853 (+)
AKR/J	ENSMUSG00220043767	unclassified gene	Chr12:101143738-101146646 (+)
BALB/cJ	ENSMUSG00180049613	unclassified gene	Chr12:102463271-102466191 (+)
C3H/HeJ	ENSMUSG00175040201	unclassified gene	Chr12:105071717-105074625 (+)
C57BL/6NJ	ENSMUSG00215050473	unclassified gene	Chr12:101736211-101739131 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019356	unclassified gene	Chr12:101216329-101219233 (+)
CBA/J	ENSMUSG00210035959	unclassified gene	Chr12:102133210-102136118 (+)
DBA/2J	ENSMUSG00185029432	unclassified gene	Chr12:103920303-103923223 (+)
FVB/NJ	ENSMUSG00205019122	unclassified gene	Chr12:101150758-101153678 (+)
JF1/MsJ	ENSUMUG00000025773	unclassified gene	Chr12:108676154-108679062 (+)
LP/J	ENSMUSG00230032380	unclassified gene	Chr12:110965102-110968022 (+)
NOD/ShiLtJ	ENSMUSG00190038354	unclassified gene	Chr12:84078960-84081868 (-)
NZO/HlLtJ	ENSMUSG00225039879	unclassified gene	Chr12:112723807-112726727 (+)
PWK/PhJ	ENSLUMG00010045160	unclassified gene	Chr12:102154494-102157404 (+)
SPRET/EiJ	ENSMSPG00010018507	unclassified gene	Chr12:104455445-104458416 (+)
WSB/EiJ	ENSIUOG00005009685	unclassified gene	Chr12:101151294-101154207 (+)

Homology

• Gene Tree
  Gm47980
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000113966 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113966	Ensembl Gene Model | MGI Sequence Detail	2921	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;