Gm47967 Pseudogene Detail

Summary

• Symbol
  Gm47967
• Name
  predicted gene, 47967

• Feature Type
  pseudogene
• IDs
  MGI:6097247
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:54087830-54088919 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097247	pseudogene	Chr10:54087830-54088919 (+)
129S1/SvImJ	ENSMUSG00200028860	pseudogene	Chr10:51000200-51001289 (+)
A/J	ENSMUSG00195027995	pseudogene	Chr10:51253334-51254423 (+)
AKR/J	ENSMUSG00220041492	pseudogene	Chr10:50949795-50950884 (+)
BALB/cJ	ENSMUSG00180028279	pseudogene	Chr10:51382922-51384011 (+)
C3H/HeJ	ENSMUSG00175026312	pseudogene	Chr10:51125821-51126910 (+)
C57BL/6NJ	ENSMUSG00215034156	pseudogene	Chr10:50901011-50902100 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029448	pseudogene	Chr10:51094505-51094855 (+)
CBA/J	ENSMUSG00210037001	pseudogene	Chr10:51031621-51032710 (+)
DBA/2J	ENSMUSG00185042327	pseudogene	Chr10:51183381-51184470 (+)
FVB/NJ	ENSMUSG00205036606	pseudogene	Chr10:51100924-51102013 (+)
JF1/MsJ	ENSUMUG00000022578	pseudogene	Chr10:50849491-50849841 (+)
LP/J	ENSMUSG00230023812	pseudogene	Chr10:52984781-52985870 (+)
NOD/ShiLtJ	ENSMUSG00190039281	pseudogene	Chr10:51350340-51351429 (+)
NZO/HlLtJ	ENSMUSG00225022732	pseudogene	Chr10:57265652-57266741 (+)
PWK/PhJ	ENSLUMG00010024205	pseudogene	Chr10:51013387-51013739 (+)
SPRET/EiJ	ENSMSPG00010027241	pseudogene	Chr10:52445200-52446358 (+)
WSB/EiJ	ENSIUOG00005043111	pseudogene	Chr10:50978768-50979857 (+)

Homology

• Gene Tree
  Gm47967
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112013 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112013	Ensembl Gene Model | MGI Sequence Detail	1090	C57BL/6J
transcript	ENSMUST00000220047	Ensembl | MGI Sequence Detail	1090	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;