Gm47946 Gene Detail

Summary

• Symbol
  Gm47946
• Name
  predicted gene, 47946

• Feature Type
  lncRNA gene
• IDs
  MGI:6097213
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:70248290-70251411 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  195 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097213	lncRNA gene	Chr10:70248290-70251411 (-)
129S1/SvImJ	ENSMUSG00200017764	lncRNA gene	Chr10:66942797-66945918 (-)
A/J	ENSMUSG00195006220	lncRNA gene	Chr10:67240081-67243202 (-)
AKR/J	ENSMUSG00220029497	lncRNA gene	Chr10:66908894-66912019 (-)
BALB/cJ	ENSMUSG00180007977	lncRNA gene	Chr10:67274487-67277610 (-)
C3H/HeJ	ENSMUSG00175013278	lncRNA gene	Chr10:67127143-67130207 (-)
C57BL/6NJ	ENSMUSG00215004106	lncRNA gene	Chr10:66883906-66887022 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026899	lncRNA gene	Chr10:66840585-66843582 (-)
CBA/J	ENSMUSG00210009872	lncRNA gene	Chr10:67001766-67004831 (-)
DBA/2J	ENSMUSG00185020969	lncRNA gene	Chr10:67345011-67348127 (-)
FVB/NJ	ENSMUSG00205007763	lncRNA gene	Chr10:67086925-67090045 (-)
JF1/MsJ	ENSUMUG00000024589	lncRNA gene	Chr10:68537965-68541011 (-)
LP/J	ENSMUSG00230020429	lncRNA gene	Chr10:69115061-69118177 (-)
NOD/ShiLtJ	ENSMUSG00190007950	lncRNA gene	Chr10:67342233-67345312 (-)
NZO/HlLtJ	ENSMUSG00225047870	lncRNA gene	Chr10:73411217-73414333 (-)
PWK/PhJ	ENSLUMG00010007858	lncRNA gene	Chr10:66931750-66934883 (-)
SPRET/EiJ	ENSMSPG00010023438	lncRNA gene	Chr10:68625374-68629262 (-)
WSB/EiJ	ENSIUOG00005034744	lncRNA gene	Chr10:66859529-66862657 (-)

Homology

• Gene Tree
  Gm47946
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112884 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112884	Ensembl Gene Model | MGI Sequence Detail	3122	C57BL/6J
transcript	ENSMUST00000219437	Ensembl | MGI Sequence Detail	639	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;