Gm47925 Gene Detail

Summary

• Symbol
  Gm47925
• Name
  predicted gene, 47925

• Feature Type
  lncRNA gene
• IDs
  MGI:6097183
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:4216502-4222844 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  270 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097183	lncRNA gene	Chr13:4216502-4222844 (+)
129S1/SvImJ	ENSMUSG00200007089	lncRNA gene	Chr13:1388154-1394511 (+)
A/J	ENSMUSG00195013292	lncRNA gene	Chr13:796352-802705 (+)
AKR/J	ENSMUSG00220013153	lncRNA gene	Chr13:1086890-1093226 (+)
BALB/cJ	ENSMUSG00180009573	lncRNA gene	Chr13:1208516-1214871 (+)
C3H/HeJ	ENSMUSG00175008717	lncRNA gene	Chr13:1238497-1244839 (+)
C57BL/6NJ	ENSMUSG00215017341	lncRNA gene	Chr13:1458331-1464674 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024849	lncRNA gene	Chr13:1461813-1468028 (+)
CBA/J	ENSMUSG00210022938	lncRNA gene	Chr13:777186-783528 (+)
DBA/2J	ENSMUSG00185024548	lncRNA gene	Chr13:1464947-1471290 (+)
FVB/NJ	ENSMUSG00205027966	lncRNA gene	Chr13:1210202-1216556 (+)
JF1/MsJ	ENSUMUG00000012923	lncRNA gene	Chr13:1462594-1468823 (+)
LP/J	ENSMUSG00230007650	lncRNA gene	Chr13:10935486-10941715 (+)
NOD/ShiLtJ	ENSMUSG00190013095	lncRNA gene	Chr13:924110-930446 (+)
NZO/HlLtJ	ENSMUSG00225034742	lncRNA gene	Chr13:4822634-4828851 (+)
PWK/PhJ	ENSLUMG00010017244	lncRNA gene	Chr13:842639-848842 (+)
SPRET/EiJ	ENSMSPG00010026612	lncRNA gene	Chr13:877620-884140 (+)
WSB/EiJ	ENSIUOG00005023136	lncRNA gene	Chr13:819107-825454 (+)

Homology

• Gene Tree
  Gm47925
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000113744 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113744	Ensembl Gene Model | MGI Sequence Detail	6343	C57BL/6J
transcript	ENSMUST00000221474	Ensembl | MGI Sequence Detail	486	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;