Gm47855 Gene Detail

Summary

• Symbol
  Gm47855
• Name
  predicted gene, 47855

• Feature Type
  lncRNA gene
• IDs
  MGI:6097065
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:39445887-39513997 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1748 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097065	lncRNA gene	Chr12:39445887-39513997 (-)
129S1/SvImJ	ENSMUSG00200011755	lncRNA gene	Chr12:31314148-31315051 (-)
A/J	ENSMUSG00195019692	lncRNA gene	Chr12:33993976-33994879 (-)
AKR/J	ENSMUSG00220005505	lncRNA gene	Chr12:31984069-31984972 (-)
BALB/cJ	ENSMUSG00180003604	lncRNA gene	Chr12:32981152-32982055 (-)
C3H/HeJ	ENSMUSG00175018062	lncRNA gene	Chr12:36034482-36035385 (-)
C57BL/6NJ	ENSMUSG00215013069	lncRNA gene	Chr12:32386215-32387118 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003663	lncRNA gene	Chr12:32734880-32735783 (-)
CBA/J	ENSMUSG00210016146	lncRNA gene	Chr12:32513542-32514445 (-)
DBA/2J	ENSMUSG00185020495	lncRNA gene	Chr12:34547908-34548811 (-)
FVB/NJ	ENSMUSG00205001633	lncRNA gene	Chr12:32463333-32464236 (-)
JF1/MsJ	ENSUMUG00000013498	lncRNA gene	Chr12:38711164-38712068 (-)
LP/J	ENSMUSG00230010351	lncRNA gene	Chr12:41479242-41480145 (-)
NOD/ShiLtJ	ENSMUSG00190003602	lncRNA gene	Chr12:31541955-31542858 (-)
NZO/HlLtJ	ENSMUSG00225031388	lncRNA gene	Chr12:43701103-43702006 (-)
PWK/PhJ	ENSLUMG00010012655	lncRNA gene	Chr12:32866103-32867007 (-)
SPRET/EiJ	ENSMSPG00010001951	lncRNA gene	Chr12:33711412-33712320 (-)
WSB/EiJ	ENSIUOG00005001313	lncRNA gene	Chr12:32264345-32265249 (-)

Homology

• Gene Tree
  Gm47855
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000114079 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114079	Ensembl Gene Model | MGI Sequence Detail	68111	C57BL/6J
transcript	ENSMUST00000341908	Ensembl | MGI Sequence Detail	2023	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;