Gm47837 Pseudogene Detail

Summary

• Symbol
  Gm47837
• Name
  predicted gene, 47837

• Feature Type
  pseudogene
• IDs
  MGI:6097037
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:124054767-124055333 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097037	pseudogene	Chr10:124054767-124055333 (+)
129S1/SvImJ	ENSMUSG00200026964	pseudogene	Chr10:120399676-120400242 (+)
A/J	ENSMUSG00195022791	pseudogene	Chr10:120845021-120845584 (+)
AKR/J	ENSMUSG00220015062	pseudogene	Chr10:120479355-120479921 (+)
BALB/cJ	ENSMUSG00180017447	pseudogene	Chr10:120836326-120836889 (+)
C3H/HeJ	ENSMUSG00175025740	pseudogene	Chr10:120852601-120853167 (+)
C57BL/6NJ	ENSMUSG00215020999	pseudogene	Chr10:120469455-120470021 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032352	pseudogene	Chr10:119817151-119817714 (+)
CBA/J	ENSMUSG00210021481	pseudogene	Chr10:120688092-120688658 (+)
DBA/2J	ENSMUSG00185009078	pseudogene	Chr10:120797985-120798551 (+)
FVB/NJ	ENSMUSG00205028923	pseudogene	Chr10:120103325-120103891 (+)
JF1/MsJ	ENSUMUG00000045568	pseudogene	Chr10:122130224-122130815 (+)
LP/J	ENSMUSG00230034517	pseudogene	Chr10:122718091-122718654 (+)
NOD/ShiLtJ	ENSMUSG00190019047	pseudogene	Chr10:120889093-120889656 (+)
NZO/HlLtJ	ENSMUSG00225038036	pseudogene	Chr10:126959148-126959714 (+)
PWK/PhJ	ENSLUMG00010014150	pseudogene	Chr10:120556203-120556776 (+)
SPRET/EiJ	ENSMSPG00010038364	pseudogene	Chr10:122461170-122461749 (+)
WSB/EiJ	ENSIUOG00005013894	pseudogene	Chr10:120477846-120478412 (+)

Homology

• Gene Tree
  Gm47837
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112250 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112250	Ensembl Gene Model | MGI Sequence Detail	567	C57BL/6J
transcript	ENSMUST00000220441	Ensembl | MGI Sequence Detail	567	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;