Gm47835 Pseudogene Detail

Summary

• Symbol
  Gm47835
• Name
  predicted gene, 47835

• Feature Type
  pseudogene
• IDs
  MGI:6097034
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:28796493-28797138 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097034	pseudogene	Chr10:28796493-28797138 (+)
129S1/SvImJ	ENSMUSG00200009787	pseudogene	Chr10:25637410-25638055 (+)
A/J	ENSMUSG00195014315	pseudogene	Chr10:25921094-25921739 (+)
AKR/J	ENSMUSG00220011491	pseudogene	Chr10:25606235-25606879 (+)
BALB/cJ	ENSMUSG00180018434	pseudogene	Chr10:26046209-26046854 (+)
C3H/HeJ	ENSMUSG00175025692	pseudogene	Chr10:25767637-25768281 (+)
C57BL/6NJ	ENSMUSG00215013984	pseudogene	Chr10:25594392-25595037 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014163	pseudogene	Chr10:25405514-25406155 (+)
CBA/J	ENSMUSG00210023597	pseudogene	Chr10:25695565-25696209 (+)
DBA/2J	ENSMUSG00185007774	pseudogene	Chr10:25867711-25868355 (+)
FVB/NJ	ENSMUSG00205010238	pseudogene	Chr10:25863104-25863748 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230012112	pseudogene	Chr10:27649710-27650355 (+)
NOD/ShiLtJ	ENSMUSG00190015376	pseudogene	Chr10:25986811-25987456 (+)
NZO/HlLtJ	ENSMUSG00225034418	pseudogene	Chr10:31908613-31909258 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010015871	pseudogene	Chr10:26419731-26419951 (+)
WSB/EiJ	ENSIUOG00005032845	pseudogene	Chr10:25335097-25335741 (+)

Homology

• Gene Tree
  Gm47835
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000111991 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111991	Ensembl Gene Model | MGI Sequence Detail	646	C57BL/6J
transcript	ENSMUST00000219942	Ensembl | MGI Sequence Detail	244	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;