Gm47769 Gene Detail

Summary

• Symbol
  Gm47769
• Name
  predicted gene, 47769

• Feature Type
  lncRNA gene
• IDs
  MGI:6096924
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:17387760-17535453 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3603 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096924	lncRNA gene	Chr10:17387760-17535453 (-)
129S1/SvImJ	ENSMUSG00200011483	lncRNA gene	Chr10:14374292-14382787 (-)
A/J	ENSMUSG00195006936	lncRNA gene	Chr10:14384980-14393477 (-)
AKR/J	ENSMUSG00220010133	lncRNA gene	Chr10:14296052-14304546 (-)
BALB/cJ	ENSMUSG00180015091	lncRNA gene	Chr10:14509290-14517787 (-)
C3H/HeJ	ENSMUSG00175021344	lncRNA gene	Chr10:14529219-14537716 (-)
C57BL/6NJ	ENSMUSG00215003733	lncRNA gene	Chr10:14338646-14347140 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030441	lncRNA gene	Chr10:14301918-14310433 (-)
CBA/J	ENSMUSG00210015800	lncRNA gene	Chr10:14466874-14475371 (-)
DBA/2J	ENSMUSG00185007200	lncRNA gene	Chr10:14451368-14459865 (-)
FVB/NJ	ENSMUSG00205019090	lncRNA gene	Chr10:14355780-14364274 (-)
JF1/MsJ	ENSUMUG00000015185	lncRNA gene	Chr10:14518749-14527257 (-)
LP/J	ENSMUSG00230019088	lncRNA gene	Chr10:16107900-16116397 (-)
NOD/ShiLtJ	ENSMUSG00190011459	lncRNA gene	Chr10:14437922-14446417 (-)
NZO/HlLtJ	ENSMUSG00225030886	lncRNA gene	Chr10:20597592-20606086 (-)
PWK/PhJ	ENSLUMG00010015288	lncRNA gene	Chr10:14244806-14253314 (-)
SPRET/EiJ	ENSMSPG00010010922	lncRNA gene	Chr10:14830888-14839384 (-)
WSB/EiJ	ENSIUOG00005024166	lncRNA gene	Chr10:14053897-14062392 (-)

Homology

• Gene Tree
  Gm47769
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36

• Ensembl
  ENSMUSG00000112587 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112587	Ensembl Gene Model | MGI Sequence Detail	147694	C57BL/6J
transcript	ENSMUST00000296990	Ensembl | MGI Sequence Detail	1506	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;