Gm47761 Gene Detail

Summary

• Symbol
  Gm47761
• Name
  predicted gene, 47761

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:6096912
  NCBI Gene: 115487382
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:17194356-17199456 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  44 from dbSNP Build 142
• Strain Annotations
  48

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096912	lncRNA gene	Chr10:17193833-17199456 (-)
129S1/SvImJ	ENSMUSG00200010798	lncRNA gene	Chr10:23623201-23629149 (-)
129S1/SvImJ	ENSMUSG00200003741	lncRNA gene	Chr4:50011962-50017918 (-)
129S1/SvImJ	ENSMUSG00200011449	lncRNA gene	Chr10:14181707-14186850 (-)
129S1/SvImJ	ENSMUSG00200039181	lncRNA gene	Chr1:81637855-81643811 (-)
129S1/SvImJ	ENSMUSG00200041259	lncRNA gene	Chr9:34620332-34626299 (-)
129S1/SvImJ	ENSMUSG00200035302	lncRNA gene	Chr11:6984678-6990635 (+)
A/J	ENSMUSG00195024784	lncRNA gene	Chr11:6869725-6875681 (+)
A/J	ENSMUSG00195035370	lncRNA gene	Chr6:55453522-55459480 (-)
A/J	ENSMUSG00195006927	lncRNA gene	Chr10:14190533-14195676 (-)
AKR/J	ENSMUSG00220044823	lncRNA gene	Chr1:81217201-81222892 (-)
BALB/cJ	ENSMUSG00180015068	lncRNA gene	Chr10:14314845-14319988 (-)
BALB/cJ	ENSMUSG00180029738	lncRNA gene	Chr11:6880471-6886427 (+)
BALB/cJ	ENSMUSG00180010805	lncRNA gene	Chr6:55809978-55815936 (-)
C3H/HeJ	ENSMUSG00175027156	lncRNA gene	Chr10:23722514-23728462 (-)
C3H/HeJ	ENSMUSG00175010805	lncRNA gene	Chr11:6875285-6881241 (+)
C3H/HeJ	ENSMUSG00175042759	lncRNA gene	Chr6:55495884-55501842 (-)
C3H/HeJ	ENSMUSG00175021329	lncRNA gene	Chr10:14334809-14339952 (-)
C57BL/6NJ	ENSMUSG00215028892	lncRNA gene	Chr4:49993777-49999733 (-)
C57BL/6NJ	ENSMUSG00215003721	lncRNA gene	Chr10:14144179-14149323 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210015796	lncRNA gene	Chr10:14272453-14277596 (-)
CBA/J	ENSMUSG00210019755	lncRNA gene	Chr4:49899392-49905348 (-)
CBA/J	ENSMUSG00210018607	lncRNA gene	Chr11:6879556-6885512 (+)
DBA/2J	ENSMUSG00185007182	lncRNA gene	Chr10:14256927-14262070 (-)
FVB/NJ	ENSMUSG00205019015	lncRNA gene	Chr10:14161290-14166433 (-)
FVB/NJ	ENSMUSG00205025722	lncRNA gene	Chr4:49513343-49519300 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230036178	lncRNA gene	Chr11:8031519-8037475 (+)
LP/J	ENSMUSG00230012936	lncRNA gene	Chr10:25657622-25663570 (-)
LP/J	ENSMUSG00230019250	lncRNA gene	Chr10:15913453-15918596 (-)
LP/J	ENSMUSG00230023058	lncRNA gene	Chr1:82202316-82208272 (-)
LP/J	ENSMUSG00230046997	lncRNA gene	Chr15:83445296-83451252 (+)
LP/J	ENSMUSG00230014799	lncRNA gene	Chr6:57311100-57317058 (-)
LP/J	ENSMUSG00230005285	lncRNA gene	Chr4:53810295-53816251 (-)
LP/J	ENSMUSG00230029957	lncRNA gene	Chr16:43854590-43860546 (+)
NOD/ShiLtJ	ENSMUSG00190035453	lncRNA gene	Chr1:81436910-81442601 (-)
NZO/HlLtJ	ENSMUSG00225016434	lncRNA gene	Chr10:20403143-20408286 (-)
NZO/HlLtJ	ENSMUSG00225003506	lncRNA gene	Chr4:58406453-58412409 (-)
PWK/PhJ	ENSLUMG00010053516	lncRNA gene	Chr17:26774814-26780505 (+)
SPRET/EiJ	ENSMSPG00010009577	lncRNA gene	Chr14:97390155-97395846 (-)
WSB/EiJ	ENSIUOG00005021760	lncRNA gene	Chr6:55788449-55794407 (-)
WSB/EiJ	ENSIUOG00005024135	lncRNA gene	Chr10:13862637-13867780 (-)
WSB/EiJ	ENSIUOG00005044515	lncRNA gene	Chr1:80934161-80940117 (-)
WSB/EiJ	ENSIUOG00005032992	lncRNA gene	Chr10:23302818-23308766 (-)
WSB/EiJ	ENSIUOG00005004895	lncRNA gene	Chr4:49868491-49874447 (-)
WSB/EiJ	ENSIUOG00005013667	lncRNA gene	Chr16:41498421-41504377 (+)
WSB/EiJ	ENSIUOG00005004869	lncRNA gene	Chr4:47796304-47802260 (+)
WSB/EiJ	ENSIUOG00005053538	lncRNA gene	Chr2:91383777-91389732 (+)
WSB/EiJ	ENSIUOG00005034519	lncRNA gene	Chr17:63165222-63171186 (+)

Homology

• Gene Tree
  Gm47761
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  52

• Ensembl
  ENSMUSG00000112478 (Evidence)
• NCBI Gene
  115487382

Representative Sequences			Length	Strain/Species
genomic	115487382	NCBI Gene Model | MGI Sequence Detail	5101	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;