Gm47760 Gene Detail

Summary

• Symbol
  Gm47760
• Name
  predicted gene, 47760

• Feature Type
  lncRNA gene
• IDs
  MGI:6096910
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:17170182-17208625 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  812 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096910	lncRNA gene	Chr10:17170182-17208625 (-)
129S1/SvImJ	ENSMUSG00200010695	lncRNA gene	Chr10:14158154-14196500 (-)
A/J	ENSMUSG00195006843	lncRNA gene	Chr10:14166943-14205326 (-)
AKR/J	ENSMUSG00220010232	lncRNA gene	Chr10:14089385-14120051 (-)
BALB/cJ	ENSMUSG00180016086	lncRNA gene	Chr10:14291270-14329638 (-)
C3H/HeJ	ENSMUSG00175020990	lncRNA gene	Chr10:14311215-14349602 (-)
C57BL/6NJ	ENSMUSG00215004003	lncRNA gene	Chr10:14120604-14158974 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031864	lncRNA gene	Chr10:14086592-14117439 (-)
CBA/J	ENSMUSG00210015892	lncRNA gene	Chr10:14248873-14287246 (-)
DBA/2J	ENSMUSG00185007596	lncRNA gene	Chr10:14233339-14271720 (-)
FVB/NJ	ENSMUSG00205018513	lncRNA gene	Chr10:14137706-14176084 (-)
JF1/MsJ	ENSUMUG00000014008	lncRNA gene	Chr10:14312444-14343390 (-)
LP/J	ENSMUSG00230019336	lncRNA gene	Chr10:15889867-15928246 (-)
NOD/ShiLtJ	ENSMUSG00190011212	lncRNA gene	Chr10:14229324-14260008 (-)
NZO/HlLtJ	ENSMUSG00225016475	lncRNA gene	Chr10:20379562-20417935 (-)
PWK/PhJ	ENSLUMG00010015561	lncRNA gene	Chr10:14038093-14069043 (-)
SPRET/EiJ	ENSMSPG00010011530	lncRNA gene	Chr10:14614138-14644592 (-)
WSB/EiJ	ENSIUOG00005023083	lncRNA gene	Chr10:13839072-13877431 (-)

Homology

• Gene Tree
  Gm47760
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000111922 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111922	Ensembl Gene Model | MGI Sequence Detail	38444	C57BL/6J
transcript	ENSMUST00000303295	Ensembl | MGI Sequence Detail	978	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;