Gm47758 Gene Detail

Summary

• Symbol
  Gm47758
• Name
  predicted gene, 47758

• Feature Type
  lncRNA gene
• IDs
  MGI:6096907
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:7312550-7314872 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  192 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096907	lncRNA gene	Chr14:7312550-7314872 (+)
129S1/SvImJ	ENSMUSG00200025893	lncRNA gene	Chr14:3918725-3921013 (+)
A/J	ENSMUSG00195032071	lncRNA gene	Chr14:4772940-4775262 (+)
AKR/J	ENSMUSG00220024081	lncRNA gene	Chr14:3933076-3935398 (+)
BALB/cJ	ENSMUSG00180025419	lncRNA gene	Chr14:4089745-4092067 (+)
C3H/HeJ	ENSMUSG00175009395	lncRNA gene	Chr14:4062861-4065149 (+)
C57BL/6NJ	ENSMUSG00215019117	lncRNA gene	Chr14:4352301-4354623 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031101	lncRNA gene	Chr14:4036926-4039233 (+)
CBA/J	ENSMUSG00210036844	lncRNA gene	Chr14:4285301-4287589 (+)
DBA/2J	ENSMUSG00185037359	lncRNA gene	Chr14:4291061-4293349 (+)
FVB/NJ	ENSMUSG00205025491	lncRNA gene	Chr14:4319698-4322020 (+)
JF1/MsJ	ENSUMUG00000026031	lncRNA gene	Chr14:4293013-4295301 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190034310	lncRNA gene	Chr14:4344978-4347300 (+)
NZO/HlLtJ	ENSMUSG00225037258	lncRNA gene	Chr14:4746104-4748426 (+)
PWK/PhJ	ENSLUMG00010033197	lncRNA gene	Chr14:25612459-25614747 (+)
SPRET/EiJ	ENSMSPG00010002519	lncRNA gene	Chr14:4546270-4548584 (+)
WSB/EiJ	ENSIUOG00005025876	lncRNA gene	Chr14:4172677-4174999 (+)

Homology

• Gene Tree
  Gm47758
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000114323 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114323	Ensembl Gene Model | MGI Sequence Detail	2323	C57BL/6J
transcript	ENSMUST00000225983	Ensembl | MGI Sequence Detail	1184	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;