Gm47753 Pseudogene Detail

Summary

• Symbol
  Gm47753
• Name
  predicted gene, 47753

• Feature Type
  pseudogene
• IDs
  MGI:6096899
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:37766247-37766540 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096899	pseudogene	Chr13:37766247-37766540 (+)
129S1/SvImJ	ENSMUSG00200012770	pseudogene	Chr13:34991448-34991741 (+)
A/J	ENSMUSG00195035470	pseudogene	Chr13:34068596-34068889 (+)
AKR/J	ENSMUSG00220034665	pseudogene	Chr13:33838074-33838367 (+)
BALB/cJ	ENSMUSG00180008596	pseudogene	Chr13:34374195-34374488 (+)
C3H/HeJ	ENSMUSG00175013325	pseudogene	Chr13:34326871-34327164 (+)
C57BL/6NJ	ENSMUSG00215017553	pseudogene	Chr13:34496017-34496310 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037573	pseudogene	Chr13:34426696-34426987 (+)
CBA/J	ENSMUSG00210011945	pseudogene	Chr13:34334597-34334890 (+)
DBA/2J	ENSMUSG00185035467	pseudogene	Chr13:35161237-35161530 (+)
FVB/NJ	ENSMUSG00205038944	pseudogene	Chr13:34029974-34030267 (+)
JF1/MsJ	ENSUMUG00000034367	pseudogene	Chr13:34720231-34720524 (+)
LP/J	ENSMUSG00230016572	pseudogene	Chr13:44477534-44477827 (+)
NOD/ShiLtJ	ENSMUSG00190013015	pseudogene	Chr13:34557290-34557583 (+)
NZO/HlLtJ	ENSMUSG00225035039	pseudogene	Chr13:38270749-38271042 (+)
PWK/PhJ	ENSLUMG00010031001	pseudogene	Chr13:33550226-33550519 (+)
SPRET/EiJ	ENSMSPG00010011115	pseudogene	Chr13:33565217-33565508 (+)
WSB/EiJ	ENSIUOG00005029174	pseudogene	Chr13:33695562-33695855 (+)

Homology

• Gene Tree
  Gm47753
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000114718 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114718	Ensembl Gene Model | MGI Sequence Detail	294	C57BL/6J
transcript	ENSMUST00000223615	Ensembl | MGI Sequence Detail	294	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;