Gm47750 Pseudogene Detail

Summary

• Symbol
  Gm47750
• Name
  predicted gene, 47750

• Feature Type
  pseudogene
• IDs
  MGI:6096894
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:26200315-26200512 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096894	pseudogene	Chr12:26200315-26200512 (+)
129S1/SvImJ	ENSMUSG00200023098	pseudogene	Chr12:17938437-17938634 (+)
A/J	ENSMUSG00195022905	pseudogene	Chr12:20670503-20670700 (+)
AKR/J	ENSMUSG00220027431	pseudogene	Chr12:18617382-18617579 (+)
BALB/cJ	ENSMUSG00180010223	pseudogene	Chr12:19613183-19613380 (+)
C3H/HeJ	ENSMUSG00175022274	pseudogene	Chr12:22661414-22661611 (+)
C57BL/6NJ	ENSMUSG00215006111	pseudogene	Chr12:19096604-19096801 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005938	pseudogene	Chr12:19485137-19485334 (+)
CBA/J	ENSMUSG00210007920	pseudogene	Chr12:19147593-19147790 (+)
DBA/2J	ENSMUSG00185015274	pseudogene	Chr12:21171936-21172133 (+)
FVB/NJ	ENSMUSG00205002120	pseudogene	Chr12:19243940-19244137 (+)
JF1/MsJ	ENSUMUG00000007212	pseudogene	Chr12:25407086-25407283 (+)
LP/J	ENSMUSG00230006900	pseudogene	Chr12:28142508-28142705 (+)
NOD/ShiLtJ	ENSMUSG00190014644	pseudogene	Chr12:18119990-18120187 (+)
NZO/HlLtJ	ENSMUSG00225034672	pseudogene	Chr12:30335347-30335544 (+)
PWK/PhJ	ENSLUMG00010004658	pseudogene	Chr12:19672730-19672927 (+)
SPRET/EiJ	ENSMSPG00010003488	pseudogene	Chr12:19950187-19950384 (+)
WSB/EiJ	ENSIUOG00005001796	pseudogene	Chr12:18812856-18813053 (+)

Homology

• Gene Tree
  Gm47750
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000113611 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113611	Ensembl Gene Model | MGI Sequence Detail	198	C57BL/6J
transcript	ENSMUST00000220612	Ensembl | MGI Sequence Detail	198	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;