Gm47749 Pseudogene Detail

Summary

• Symbol
  Gm47749
• Name
  predicted gene, 47749

• Feature Type
  pseudogene
• IDs
  MGI:6096893
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:15471991-15472582 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  25

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096893	pseudogene	Chr14:15471991-15472582 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220029421	pseudogene	Chr14:11552389-11552964 (-)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215025013	pseudogene	Chr14:21670-22261 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185041555	pseudogene	Chr14:12030355-12030941 (-)
DBA/2J	ENSMUSG00185041124	pseudogene	Chr14:12570254-12570845 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000044697	pseudogene	Chr14:13325787-13326376 (+)
JF1/MsJ	ENSUMUG00000044683	pseudogene	Chr14:12950437-12951028 (-)
JF1/MsJ	ENSUMUG00000045569	pseudogene	Chr14:17734885-17735476 (+)
JF1/MsJ	ENSUMUG00000038813	pseudogene	Chr14:12737699-12738290 (-)
JF1/MsJ	ENSUMUG00000052135	pseudogene	Chr14:22118024-22118612 (+)
JF1/MsJ	ENSUMUG00000052182	pseudogene	Chr14:22806457-22807048 (+)
JF1/MsJ	ENSUMUG00000052217	pseudogene	Chr14:23303353-23303943 (+)
JF1/MsJ	ENSUMUG00000044870	pseudogene	Chr14:14149271-14149862 (+)
LP/J	ENSMUSG00230016216	pseudogene	Chr14:16542179-16542770 (-)
LP/J	ENSMUSG00230041568	pseudogene	Chr14:22696570-22737717 (-)
LP/J	ENSMUSG00230016851	pseudogene	Chr14:19906674-19907265 (-)
LP/J	ENSMUSG00230016258	pseudogene	Chr14:13450487-13526147 (-)
LP/J	ENSMUSG00230016326	pseudogene	Chr14:15056072-15056663 (-)
LP/J	ENSMUSG00230016229	pseudogene	Chr14:12984449-12985037 (-)
LP/J	ENSMUSG00230017061	pseudogene	Chr14:15684114-15684701 (-)
LP/J	ENSMUSG00230017097	pseudogene	Chr14:17994807-17995398 (-)
LP/J	ENSMUSG00230016376	pseudogene	Chr14:15420854-15421445 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010034118	pseudogene	Chr14:12521828-12522401 (-)
SPRET/EiJ	ENSMSPG00010034154	pseudogene	Chr14:12585390-12585982 (-)
SPRET/EiJ	ENSMSPG00010034091	pseudogene	Chr14:12399825-12400405 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm47749
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27

• Ensembl
  ENSMUSG00000114611 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114611	Ensembl Gene Model | MGI Sequence Detail	592	C57BL/6J
transcript	ENSMUST00000225769	Ensembl | MGI Sequence Detail	592	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;