Gm47747 Pseudogene Detail

Summary

• Symbol
  Gm47747
• Name
  predicted gene, 47747

• Feature Type
  pseudogene
• IDs
  MGI:6096891
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:15512148-15512828 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  22

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096891	pseudogene	Chr14:15512148-15512828 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220027537	pseudogene	Chr14:11552222-11552933 (-)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215024944	pseudogene	Chr14:21485-22230 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185041670	pseudogene	Chr14:13047437-13048113 (-)
DBA/2J	ENSMUSG00185041020	pseudogene	Chr14:12610425-12611105 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000040033	pseudogene	Chr14:16884076-16884757 (-)
JF1/MsJ	ENSUMUG00000039892	pseudogene	Chr14:13872975-13873656 (+)
JF1/MsJ	ENSUMUG00000047918	pseudogene	Chr14:21167527-21168208 (+)
JF1/MsJ	ENSUMUG00000039931	pseudogene	Chr14:18909006-18909687 (+)
JF1/MsJ	ENSUMUG00000040007	pseudogene	Chr14:14458435-14459116 (-)
JF1/MsJ	ENSUMUG00000039968	pseudogene	Chr14:20373543-20374224 (+)
JF1/MsJ	ENSUMUG00000039911	pseudogene	Chr14:17948503-17949184 (+)
JF1/MsJ	ENSUMUG00000047946	pseudogene	Chr14:21639531-21640212 (+)
LP/J	ENSMUSG00230016546	pseudogene	Chr14:17064531-17065207 (-)
LP/J	ENSMUSG00230015952	pseudogene	Chr14:21032843-21033519 (-)
LP/J	ENSMUSG00230016824	pseudogene	Chr14:19821193-19821869 (-)
LP/J	ENSMUSG00230016261	pseudogene	Chr14:13584284-13584960 (-)
LP/J	ENSMUSG00230016338	pseudogene	Chr14:15181902-15182578 (-)
LP/J	ENSMUSG00230016568	pseudogene	Chr14:17909409-17910085 (-)
LP/J	ENSMUSG00230016561	pseudogene	Chr14:17510780-17511456 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225036625	pseudogene	Chr14:14260590-14261266 (-)
NZO/HlLtJ	ENSMUSG00225036621	pseudogene	Chr14:14077897-14078573 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm47747
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000114950 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114950	Ensembl Gene Model | MGI Sequence Detail	681	C57BL/6J
transcript	ENSMUST00000224863	Ensembl | MGI Sequence Detail	681	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;