Gm47744 Pseudogene Detail

Summary

• Symbol
  Gm47744
• Name
  predicted gene, 47744

• Feature Type
  pseudogene
• IDs
  MGI:6096888
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:75711265-75711638 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096888	pseudogene	Chr10:75711265-75711638 (+)
129S1/SvImJ	ENSMUSG00200050079	pseudogene	Chr10:72412776-72413149 (+)
A/J	ENSMUSG00195050995	pseudogene	Chr10:72724915-72725288 (+)
AKR/J	ENSMUSG00220048672	pseudogene	Chr10:72384655-72385028 (+)
BALB/cJ	ENSMUSG00180053542	pseudogene	Chr10:72739379-72739752 (+)
C3H/HeJ	ENSMUSG00175052965	pseudogene	Chr10:72610710-72611083 (+)
C57BL/6NJ	ENSMUSG00215053335	pseudogene	Chr10:72348304-72348677 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051703	pseudogene	Chr10:72224198-72224514 (+)
CBA/J	ENSMUSG00210049814	pseudogene	Chr10:72466884-72467257 (+)
DBA/2J	ENSMUSG00185054400	pseudogene	Chr10:72809172-72809545 (+)
FVB/NJ	ENSMUSG00205050841	pseudogene	Chr10:72502192-72502565 (+)
JF1/MsJ	ENSUMUG00000056181	pseudogene	Chr10:73950870-73951186 (+)
LP/J	ENSMUSG00230051268	pseudogene	Chr10:74578768-74579141 (+)
NOD/ShiLtJ	ENSMUSG00190053032	pseudogene	Chr10:72786700-72787073 (+)
NZO/HlLtJ	ENSMUSG00225048234	pseudogene	Chr10:78875248-78875621 (+)
PWK/PhJ	ENSLUMG00010052414	pseudogene	Chr10:72345775-72346091 (+)
SPRET/EiJ	ENSMSPG00010047516	pseudogene	Chr10:74147300-74147671 (+)
WSB/EiJ	ENSIUOG00005051927	pseudogene	Chr10:72375370-72375742 (+)

Homology

• Gene Tree
  Gm47744
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112306 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112306	Ensembl Gene Model | MGI Sequence Detail	374	C57BL/6J
transcript	ENSMUST00000220036	Ensembl | MGI Sequence Detail	374	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;