Gm47631 Gene Detail

Summary

• Symbol
  Gm47631
• Name
  predicted gene, 47631

• Feature Type
  lncRNA gene
• IDs
  MGI:6096701
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:100208725-100219693 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4 from dbSNP Build 142
• Strain Annotations
  48

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096701	lncRNA gene	Chr10:100208725-100219693 (-)
129S1/SvImJ	ENSMUSG00200020733	lncRNA gene	Chr10:96681125-96681730 (+)
129S1/SvImJ	ENSMUSG00200020725	lncRNA gene	Chr10:96676000-96676609 (+)
129S1/SvImJ	ENSMUSG00200020712	lncRNA gene	Chr10:96640884-96641489 (-)
129S1/SvImJ	ENSMUSG00200020719	lncRNA gene	Chr10:96670881-96671490 (+)
129S1/SvImJ	ENSMUSG00200020235	lncRNA gene	Chr10:96683600-96704773 (-)
A/J	ENSMUSG00195017982	lncRNA gene	Chr10:97112312-97112918 (+)
A/J	ENSMUSG00195017968	lncRNA gene	Chr10:97107188-97107797 (+)
A/J	ENSMUSG00195017952	lncRNA gene	Chr10:97102069-97102678 (+)
A/J	ENSMUSG00195017928	lncRNA gene	Chr10:97072072-97072677 (-)
A/J	ENSMUSG00195015765	lncRNA gene	Chr10:97114788-97130809 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180009452	lncRNA gene	Chr10:97122404-97138422 (-)
BALB/cJ	ENSMUSG00180010409	lncRNA gene	Chr10:97114800-97115409 (+)
BALB/cJ	ENSMUSG00180010415	lncRNA gene	Chr10:97119928-97120534 (+)
BALB/cJ	ENSMUSG00180010402	lncRNA gene	Chr10:97109681-97110290 (+)
BALB/cJ	ENSMUSG00180010395	lncRNA gene	Chr10:97079686-97080291 (-)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215008950	lncRNA gene	Chr10:96700015-96700624 (+)
C57BL/6NJ	ENSMUSG00215006590	lncRNA gene	Chr10:96712746-96733905 (-)
C57BL/6NJ	ENSMUSG00215008985	lncRNA gene	Chr10:96710258-96710864 (+)
C57BL/6NJ	ENSMUSG00215008937	lncRNA gene	Chr10:96670017-96670622 (-)
C57BL/6NJ	ENSMUSG00215008964	lncRNA gene	Chr10:96705134-96705743 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185019400	lncRNA gene	Chr10:97064484-97080502 (-)
DBA/2J	ENSMUSG00185020107	lncRNA gene	Chr10:97062008-97062614 (+)
DBA/2J	ENSMUSG00185020099	lncRNA gene	Chr10:97056884-97057493 (+)
DBA/2J	ENSMUSG00185020091	lncRNA gene	Chr10:97051765-97052374 (+)
DBA/2J	ENSMUSG00185020083	lncRNA gene	Chr10:97021769-97022374 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000029535	lncRNA gene	Chr10:98468460-98489634 (-)
JF1/MsJ	ENSUMUG00000034365	lncRNA gene	Chr10:98460866-98461475 (+)
JF1/MsJ	ENSUMUG00000034342	lncRNA gene	Chr10:98455747-98456356 (+)
JF1/MsJ	ENSUMUG00000034389	lncRNA gene	Chr10:98465990-98466596 (+)
JF1/MsJ	ENSUMUG00000034319	lncRNA gene	Chr10:98425753-98426358 (-)
LP/J	ENSMUSG00230023039	lncRNA gene	Chr10:98988150-99004205 (-)
LP/J	ENSMUSG00230023226	lncRNA gene	Chr10:98940318-98940923 (-)
LP/J	ENSMUSG00230023237	lncRNA gene	Chr10:98970312-98970921 (+)
LP/J	ENSMUSG00230023240	lncRNA gene	Chr10:98975431-98976040 (+)
LP/J	ENSMUSG00230023242	lncRNA gene	Chr10:98980556-98981161 (+)
LP/J	ENSMUSG00230023243	lncRNA gene	Chr10:98983031-98983638 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225041186	lncRNA gene	Chr10:103201296-103201905 (+)
NZO/HlLtJ	ENSMUSG00225041183	lncRNA gene	Chr10:103171302-103171907 (-)
NZO/HlLtJ	ENSMUSG00225041194	lncRNA gene	Chr10:103214015-103214622 (-)
NZO/HlLtJ	ENSMUSG00225041189	lncRNA gene	Chr10:103206415-103207024 (+)
NZO/HlLtJ	ENSMUSG00225041191	lncRNA gene	Chr10:103211539-103212145 (+)
PWK/PhJ	ENSLUMG00010006178	lncRNA gene	Chr10:96726028-96726635 (+)
PWK/PhJ	ENSLUMG00010006176	lncRNA gene	Chr10:96697954-96698559 (-)
PWK/PhJ	ENSLUMG00010006158	lncRNA gene	Chr10:96749123-96770554 (-)
PWK/PhJ	ENSLUMG00010006185	lncRNA gene	Chr10:96741405-96742012 (+)
PWK/PhJ	ENSLUMG00010006179	lncRNA gene	Chr10:96731152-96731759 (+)
PWK/PhJ	ENSLUMG00010006182	lncRNA gene	Chr10:96736282-96736889 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm47631
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  50

• Ensembl
  ENSMUSG00000112485 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112485	Ensembl Gene Model | MGI Sequence Detail	10969	C57BL/6J
transcript	ENSMUST00000219325	Ensembl | MGI Sequence Detail	611	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;