Gm47614 Gene Detail

Summary

• Symbol
  Gm47614
• Name
  predicted gene, 47614

• Feature Type
  lncRNA gene
• IDs
  MGI:6096675
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:51658072-51663120 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  253 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096675	lncRNA gene	Chr10:51658072-51663120 (-)
129S1/SvImJ	ENSMUSG00200008007	lncRNA gene	Chr10:48547582-48552542 (-)
A/J	ENSMUSG00195003293	lncRNA gene	Chr10:48822292-48827232 (-)
AKR/J	ENSMUSG00220006469	lncRNA gene	Chr10:48502339-48507279 (-)
BALB/cJ	ENSMUSG00180012520	lncRNA gene	Chr10:48951937-48956877 (-)
C3H/HeJ	ENSMUSG00175010422	lncRNA gene	Chr10:48693125-48698077 (-)
C57BL/6NJ	ENSMUSG00215002244	lncRNA gene	Chr10:48457026-48461970 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008682	lncRNA gene	Chr10:48691067-48703310 (-)
CBA/J	ENSMUSG00210008689	lncRNA gene	Chr10:48596353-48601297 (-)
DBA/2J	ENSMUSG00185003348	lncRNA gene	Chr10:48752502-48757450 (-)
FVB/NJ	ENSMUSG00205005464	lncRNA gene	Chr10:48668386-48673330 (-)
JF1/MsJ	ENSUMUG00000026864	lncRNA gene	Chr10:48443223-48448116 (-)
LP/J	ENSMUSG00230024408	lncRNA gene	Chr10:50554044-50558996 (-)
NOD/ShiLtJ	ENSMUSG00190005608	lncRNA gene	Chr10:48916809-48921741 (-)
NZO/HlLtJ	ENSMUSG00225022920	lncRNA gene	Chr10:54834942-54839894 (-)
PWK/PhJ	ENSLUMG00010004760	lncRNA gene	Chr10:48573302-48578326 (-)
SPRET/EiJ	ENSMSPG00010014096	lncRNA gene	Chr10:49886336-49897959 (-)
WSB/EiJ	ENSIUOG00005015245	lncRNA gene	Chr10:48550240-48555202 (-)

Homology

• Gene Tree
  Gm47614
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112337 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112337	Ensembl Gene Model | MGI Sequence Detail	5049	C57BL/6J
transcript	ENSMUST00000217696	Ensembl | MGI Sequence Detail	534	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm47614:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr97568	Chr10:51663036-51663064 (-)	70 bp