Gm47591 Gene Detail

Summary

• Symbol
  Gm47591
• Name
  predicted gene, 47591

• Feature Type
  lncRNA gene
• IDs
  MGI:6096636
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:90564822-90572192 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  358 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096636	lncRNA gene	Chr10:90564822-90572192 (+)
129S1/SvImJ	ENSMUSG00200032111	lncRNA gene	Chr10:87062984-87070356 (+)
A/J	ENSMUSG00195022769	lncRNA gene	Chr10:87497602-87504976 (+)
AKR/J	ENSMUSG00220022950	lncRNA gene	Chr10:87056215-87063589 (+)
BALB/cJ	ENSMUSG00180035901	lncRNA gene	Chr10:87500480-87507854 (+)
C3H/HeJ	ENSMUSG00175023995	lncRNA gene	Chr10:87402991-87410362 (+)
C57BL/6NJ	ENSMUSG00215033760	lncRNA gene	Chr10:87076218-87083590 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038195	lncRNA gene	Chr10:86771828-86779198 (+)
CBA/J	ENSMUSG00210038975	lncRNA gene	Chr10:87243019-87250388 (+)
DBA/2J	ENSMUSG00185044358	lncRNA gene	Chr10:87466065-87473435 (+)
FVB/NJ	ENSMUSG00205023485	lncRNA gene	Chr10:87126373-87133749 (+)
JF1/MsJ	ENSUMUG00000030836	lncRNA gene	Chr10:88820701-88834628 (+)
LP/J	ENSMUSG00230019334	lncRNA gene	Chr10:89349293-89356662 (+)
NOD/ShiLtJ	ENSMUSG00190019617	lncRNA gene	Chr10:87482468-87489842 (+)
NZO/HlLtJ	ENSMUSG00225022406	lncRNA gene	Chr10:93605842-93613216 (+)
PWK/PhJ	ENSLUMG00010024943	lncRNA gene	Chr10:87114996-87122394 (+)
SPRET/EiJ	ENSMSPG00010036734	lncRNA gene	Chr10:88697398-88704879 (+)
WSB/EiJ	ENSIUOG00005039646	lncRNA gene	Chr10:87194552-87201940 (+)

Homology

• Gene Tree
  Gm47591
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112153 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112153	Ensembl Gene Model | MGI Sequence Detail	7371	C57BL/6J
transcript	ENSMUST00000218673	Ensembl | MGI Sequence Detail	2728	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;