Gm47537 Pseudogene Detail

Summary

• Symbol
  Gm47537
• Name
  predicted gene, 47537

• Feature Type
  pseudogene
• IDs
  MGI:6096545
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:81640266-81641535 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096545	pseudogene	Chr10:81640266-81641535 (+)
129S1/SvImJ	ENSMUSG00200051226	pseudogene	Chr10:78216386-78217649 (+)
A/J	ENSMUSG00195051202	pseudogene	Chr10:78662737-78664000 (+)
AKR/J	ENSMUSG00220049673	pseudogene	Chr10:78260390-78261653 (+)
BALB/cJ	ENSMUSG00180052848	pseudogene	Chr10:78673148-78674411 (+)
C3H/HeJ	ENSMUSG00175052307	pseudogene	Chr10:78543882-78545145 (+)
C57BL/6NJ	ENSMUSG00215053442	pseudogene	Chr10:78285798-78287067 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052123	pseudogene	Chr10:78038587-78039845 (+)
CBA/J	ENSMUSG00210050393	pseudogene	Chr10:78399931-78401194 (+)
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205038714	pseudogene	Chr11:6219346-6220609 (+)
JF1/MsJ	ENSUMUG00000056085	pseudogene	Chr10:79838681-79839924 (+)
LP/J	ENSMUSG00230019501	pseudogene	Chr10:80511930-80513196 (+)
NOD/ShiLtJ	ENSMUSG00190052952	pseudogene	Chr10:78655987-78657250 (+)
NZO/HlLtJ	ENSMUSG00225053859	pseudogene	Chr10:84798430-84799693 (+)
PWK/PhJ	ENSLUMG00010052597	pseudogene	Chr10:78334282-78335556 (+)
PWK/PhJ	ENSLUMG00010052816	pseudogene	Chr10:78205269-78206507 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005051814	pseudogene	Chr10:78395447-78396710 (+)

Homology

• Gene Tree
  Gm47537
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000112877 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112877	Ensembl Gene Model | MGI Sequence Detail	1270	C57BL/6J
transcript	ENSMUST00000218272	Ensembl | MGI Sequence Detail	304	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;