Gm47515 Gene Detail

Summary

• Symbol
  Gm47515
• Name
  predicted gene, 47515

• Feature Type
  lncRNA gene
• IDs
  MGI:6096509
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:68943303-69113617 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3670 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096509	lncRNA gene	Chr12:68943303-69113617 (-)
129S1/SvImJ	ENSMUSG00200004090	lncRNA gene	Chr12:60857081-60956369 (-)
A/J	ENSMUSG00195015015	lncRNA gene	Chr12:63553556-63637511 (-)
AKR/J	ENSMUSG00220015773	lncRNA gene	Chr12:61357436-61441024 (-)
BALB/cJ	ENSMUSG00180035806	lncRNA gene	Chr12:62552629-62636592 (-)
C3H/HeJ	ENSMUSG00175030817	lncRNA gene	Chr12:65647082-65731036 (-)
C57BL/6NJ	ENSMUSG00215029547	lncRNA gene	Chr12:61909976-62025320 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037937	lncRNA gene	Chr12:61923266-61994990 (-)
CBA/J	ENSMUSG00210032022	lncRNA gene	Chr12:62117054-62200997 (-)
DBA/2J	ENSMUSG00185005031	lncRNA gene	Chr12:64005402-64103836 (-)
FVB/NJ	ENSMUSG00205034237	lncRNA gene	Chr12:61745260-61828855 (-)
JF1/MsJ	ENSUMUG00000029698	lncRNA gene	Chr12:67967980-68064136 (-)
LP/J	ENSMUSG00230011765	lncRNA gene	Chr12:70988904-71075122 (-)
NOD/ShiLtJ	ENSMUSG00190007224	lncRNA gene	Chr12:61083841-61262283 (-)
NZO/HlLtJ	ENSMUSG00225039117	lncRNA gene	Chr12:73060030-73158437 (-)
PWK/PhJ	ENSLUMG00010032382	lncRNA gene	Chr12:62076244-62161176 (-)
SPRET/EiJ	ENSMSPG00010028340	lncRNA gene	Chr12:63769796-63832653 (-)
WSB/EiJ	ENSIUOG00005012743	lncRNA gene	Chr12:61811170-61896163 (-)

Homology

• Gene Tree
  Gm47515
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000113320 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113320	Ensembl Gene Model | MGI Sequence Detail	170315	C57BL/6J
transcript	ENSMUST00000314436	Ensembl | MGI Sequence Detail	1069	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;