Gm47505 Pseudogene Detail

Summary

• Symbol
  Gm47505
• Name
  predicted gene, 47505

• Feature Type
  pseudogene
• IDs
  MGI:6096491
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:63056292-63057091 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096491	pseudogene	Chr14:63056292-63057091 (+)
129S1/SvImJ	ENSMUSG00200030397	pseudogene	Chr14:51655797-51656596 (+)
A/J	ENSMUSG00195034506	pseudogene	Chr14:51828386-51829185 (+)
AKR/J	ENSMUSG00220033670	pseudogene	Chr14:51175799-51176598 (+)
BALB/cJ	ENSMUSG00180035323	pseudogene	Chr14:51450316-51451115 (+)
C3H/HeJ	ENSMUSG00175037505	pseudogene	Chr14:53191613-53192412 (+)
C57BL/6NJ	ENSMUSG00215050051	pseudogene	Chr14:51383539-51384338 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039826	pseudogene	Chr14:53115880-53116693 (+)
CBA/J	ENSMUSG00210043262	pseudogene	Chr14:51816303-51817102 (+)
DBA/2J	ENSMUSG00185032001	pseudogene	Chr14:56989410-56990209 (+)
FVB/NJ	ENSMUSG00205043984	pseudogene	Chr14:51333802-51334601 (+)
JF1/MsJ	ENSUMUG00000048869	pseudogene	Chr14:68180066-68180865 (+)
LP/J	ENSMUSG00230037550	pseudogene	Chr14:69018997-69019796 (+)
NOD/ShiLtJ	ENSMUSG00190050026	pseudogene	Chr14:51611041-51611840 (+)
NZO/HlLtJ	ENSMUSG00225046590	pseudogene	Chr14:59353195-59353994 (+)
PWK/PhJ	ENSLUMG00010052184	pseudogene	Chr14:51066183-51066981 (+)
SPRET/EiJ	ENSMSPG00010035429	pseudogene	Chr14:54545954-54546752 (+)
WSB/EiJ	ENSIUOG00005046269	pseudogene	Chr14:51063577-51064375 (+)

Homology

• Gene Tree
  Gm47505
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000114440 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114440	Ensembl Gene Model | MGI Sequence Detail	800	C57BL/6J
transcript	ENSMUST00000223767	Ensembl | MGI Sequence Detail	800	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;