Gm47493 Gene Detail

Summary

• Symbol
  Gm47493
• Name
  predicted gene, 47493

• Feature Type
  unclassified gene
• IDs
  MGI:6096474
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr13:12062228-12066941 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  246 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096474	unclassified gene	Chr13:12062228-12066941 (-)
129S1/SvImJ	ENSMUSG00200007058	unclassified gene	Chr13:9306593-9311306 (-)
A/J	ENSMUSG00195012987	unclassified gene	Chr13:8644810-8649523 (-)
AKR/J	ENSMUSG00220013647	unclassified gene	Chr13:8905122-8910249 (-)
BALB/cJ	ENSMUSG00180010688	unclassified gene	Chr13:9071769-9076482 (-)
C3H/HeJ	ENSMUSG00175008780	unclassified gene	Chr13:9104474-9109187 (-)
C57BL/6NJ	ENSMUSG00215018898	unclassified gene	Chr13:9368116-9372830 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026134	unclassified gene	Chr13:9280061-9284813 (-)
CBA/J	ENSMUSG00210023220	unclassified gene	Chr13:8625969-8630682 (-)
DBA/2J	ENSMUSG00185025657	unclassified gene	Chr13:9315108-9319821 (-)
FVB/NJ	ENSMUSG00205028087	unclassified gene	Chr13:9105151-9109864 (-)
JF1/MsJ	ENSUMUG00000011447	unclassified gene	Chr13:9356203-9361329 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190013704	unclassified gene	Chr13:8764291-8769417 (-)
NZO/HlLtJ	ENSMUSG00225032769	unclassified gene	Chr13:12697980-12702693 (-)
PWK/PhJ	ENSLUMG00010017815	unclassified gene	Chr13:8701108-8706197 (-)
SPRET/EiJ	ENSMSPG00010027129	unclassified gene	Chr13:8730567-8735298 (-)
WSB/EiJ	ENSIUOG00005023921	unclassified gene	Chr13:8545147-8549869 (-)

Homology

• Gene Tree
  Gm47493
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000112947 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112947	Ensembl Gene Model | MGI Sequence Detail	4714	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm47493:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr121410	Chr13:12068864-12068875 (-)	-1,929 bp
Tssr121409	Chr13:12068806-12068818 (-)	-1,871 bp
Tssr121408	Chr13:12066103-12066115 (-)	832 bp