Gm47492 Pseudogene Detail

Summary

• Symbol
  Gm47492
• Name
  predicted gene, 47492

• Feature Type
  pseudogene
• IDs
  MGI:6096473
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:112527484-112527786 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096473	pseudogene	Chr10:112527484-112527786 (+)
129S1/SvImJ	ENSMUSG00200011051	pseudogene	Chr10:108945380-108945682 (+)
A/J	ENSMUSG00195008809	pseudogene	Chr10:109364300-109364602 (+)
AKR/J	ENSMUSG00220025735	pseudogene	Chr10:108941631-108941933 (+)
BALB/cJ	ENSMUSG00180025406	pseudogene	Chr10:109381481-109381783 (+)
C3H/HeJ	ENSMUSG00175015782	pseudogene	Chr10:109310716-109311018 (+)
C57BL/6NJ	ENSMUSG00215012874	pseudogene	Chr10:109027529-109027831 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011697	pseudogene	Chr10:108341490-108341791 (+)
CBA/J	ENSMUSG00210011845	pseudogene	Chr10:109181321-109181623 (+)
DBA/2J	ENSMUSG00185025289	pseudogene	Chr10:109296256-109296558 (+)
FVB/NJ	ENSMUSG00205010999	pseudogene	Chr10:108641983-108642285 (+)
JF1/MsJ	ENSUMUG00000011137	pseudogene	Chr10:110600804-110601053 (+)
LP/J	ENSMUSG00230026729	pseudogene	Chr10:111255864-111256166 (+)
NOD/ShiLtJ	ENSMUSG00190021395	pseudogene	Chr10:109412099-109412401 (+)
NZO/HlLtJ	ENSMUSG00225018532	pseudogene	Chr10:115510224-115510526 (+)
PWK/PhJ	ENSLUMG00010014501	pseudogene	Chr10:108970638-108970940 (+)
SPRET/EiJ	ENSMSPG00010006018	pseudogene	Chr10:110833850-110834151 (+)
WSB/EiJ	ENSIUOG00005010884	pseudogene	Chr10:109042226-109042552 (+)

Homology

• Gene Tree
  Gm47492
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112678 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112678	Ensembl Gene Model | MGI Sequence Detail	303	C57BL/6J
transcript	ENSMUST00000219009	Ensembl | MGI Sequence Detail	303	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;