Gm47484 Gene Detail

Summary

• Symbol
  Gm47484
• Name
  predicted gene, 47484

• Feature Type
  lncRNA gene
• IDs
  MGI:6096460
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:84360628-84363850 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096460	lncRNA gene	Chr12:84360628-84363850 (-)
129S1/SvImJ	ENSMUSG00200050431	lncRNA gene	Chr12:76375038-76378260 (-)
A/J	ENSMUSG00195033944	lncRNA gene	Chr12:78994509-78997731 (-)
AKR/J	ENSMUSG00220049653	lncRNA gene	Chr12:76789636-76792858 (-)
BALB/cJ	ENSMUSG00180027471	lncRNA gene	Chr12:78032388-78035610 (-)
C3H/HeJ	ENSMUSG00175042733	lncRNA gene	Chr12:81125476-81128698 (-)
C57BL/6NJ	ENSMUSG00215046196	lncRNA gene	Chr12:77337971-77341193 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033201	lncRNA gene	Chr12:77307724-77310958 (-)
CBA/J	ENSMUSG00210045677	lncRNA gene	Chr12:77538759-77541981 (-)
DBA/2J	ENSMUSG00185043314	lncRNA gene	Chr12:79395710-79398932 (-)
FVB/NJ	ENSMUSG00205044744	lncRNA gene	Chr12:77207379-77210601 (-)
JF1/MsJ	ENSUMUG00000048895	lncRNA gene	Chr12:83392255-83395483 (-)
LP/J	ENSMUSG00230047092	lncRNA gene	Chr12:86458263-86461485 (-)
NOD/ShiLtJ	ENSMUSG00190047321	lncRNA gene	Chr12:76595726-76598948 (-)
NZO/HlLtJ	ENSMUSG00225053398	lncRNA gene	Chr12:88496005-88499227 (-)
PWK/PhJ	ENSLUMG00010030467	lncRNA gene	Chr12:77409251-77412473 (-)
SPRET/EiJ	ENSMSPG00010020446	lncRNA gene	Chr12:79226306-79229524 (-)
WSB/EiJ	ENSIUOG00005044800	lncRNA gene	Chr12:77224831-77228046 (-)

Homology

• Gene Tree
  Gm47484
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000113529 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113529	Ensembl Gene Model | MGI Sequence Detail	3223	C57BL/6J
transcript	ENSMUST00000222984	Ensembl | MGI Sequence Detail	3223	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;