Gm47415 Gene Detail

Summary

• Symbol
  Gm47415
• Name
  predicted gene, 47415

• Feature Type
  lncRNA gene
• IDs
  MGI:6096352
  NCBI Gene: 102638980
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:98042614-98074826 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1058 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096352	lncRNA gene	Chr12:98042614-98074852 (-)
129S1/SvImJ	ENSMUSG00200017951	lncRNA gene	Chr12:89826123-89858432 (-)
A/J	ENSMUSG00195022128	lncRNA gene	Chr12:92375593-92407814 (-)
AKR/J	ENSMUSG00220018159	lncRNA gene	Chr12:90267536-90299752 (-)
BALB/cJ	ENSMUSG00180039735	lncRNA gene	Chr12:91526477-91558705 (-)
C3H/HeJ	ENSMUSG00175033895	lncRNA gene	Chr12:94158028-94190245 (-)
C57BL/6NJ	ENSMUSG00215019755	lncRNA gene	Chr12:90826547-90858760 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006126	lncRNA gene	Chr12:90475993-90506721 (-)
CBA/J	ENSMUSG00210019028	lncRNA gene	Chr12:91188442-91220758 (-)
DBA/2J	ENSMUSG00185047942	lncRNA gene	Chr12:92967686-92999910 (-)
FVB/NJ	ENSMUSG00205000697	lncRNA gene	Chr12:90352179-90384495 (-)
JF1/MsJ	ENSUMUG00000024030	lncRNA gene	Chr12:97684891-97717647 (-)
LP/J	ENSMUSG00230004898	lncRNA gene	Chr12:100091342-100123639 (-)
NOD/ShiLtJ	ENSMUSG00190005359	lncRNA gene	Chr12:94929323-94961538 (+)
NZO/HlLtJ	ENSMUSG00225033923	lncRNA gene	Chr12:101799442-101831577 (-)
PWK/PhJ	ENSLUMG00010013905	lncRNA gene	Chr12:91177417-91210857 (-)
SPRET/EiJ	ENSMSPG00010020632	lncRNA gene	Chr12:93599802-93637663 (-)
WSB/EiJ	ENSIUOG00005002188	lncRNA gene	Chr12:90174718-90206863 (-)

Homology

• Gene Tree
  Gm47415
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000112812 (Evidence)
• NCBI Gene
  102638980

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112812	Ensembl Gene Model | MGI Sequence Detail	32213	C57BL/6J
transcript	ENSMUST00000219545	Ensembl | MGI Sequence Detail	2873	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;