Gm47384 Pseudogene Detail

Summary

• Symbol
  Gm47384
• Name
  predicted gene, 47384

• Feature Type
  pseudogene
• IDs
  MGI:6096304
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:23216336-23216455 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  34 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096304	pseudogene	Chr12:23216336-23216455 (-)
129S1/SvImJ	ENSMUSG00200023864	pseudogene	Chr12:16140321-16140440 (-)
A/J	ENSMUSG00195022087	pseudogene	Chr12:15740064-15740183 (+)
AKR/J	ENSMUSG00220028547	pseudogene	Chr12:16206365-16206480 (+)
BALB/cJ	ENSMUSG00180010897	pseudogene	Chr12:15752035-15752154 (+)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006485	pseudogene	Chr12:14726809-14726928 (+)
CBA/J	ENSMUSG00210008739	pseudogene	Chr12:17351991-17352110 (-)
CBA/J	ENSMUSG00210007889	pseudogene	Chr12:16244102-16244221 (-)
DBA/2J	ENSMUSG00185003819	pseudogene	Chr12:17377349-17377468 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000011785	pseudogene	Chr12:15585404-15585523 (+)
JF1/MsJ	ENSUMUG00000007726	pseudogene	Chr12:22132030-22132149 (-)
LP/J	ENSMUSG00230007784	pseudogene	Chr12:20377091-20377210 (-)
LP/J	ENSMUSG00230007450	pseudogene	Chr12:24344060-24344179 (-)
LP/J	ENSMUSG00230007437	pseudogene	Chr12:23597449-23597568 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225034492	pseudogene	Chr12:26527139-26527258 (-)
NZO/HlLtJ	ENSMUSG00225034484	pseudogene	Chr12:25547829-25547948 (+)
PWK/PhJ	ENSLUMG00010004719	pseudogene	Chr12:16935338-16935457 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm47384
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000113579 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113579	Ensembl Gene Model | MGI Sequence Detail	120	C57BL/6J
transcript	ENSMUST00000220883	Ensembl | MGI Sequence Detail	120	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;