Gm47383 Pseudogene Detail

Summary

• Symbol
  Gm47383
• Name
  predicted gene, 47383

• Feature Type
  pseudogene
• IDs
  MGI:6096303
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:23205958-23206065 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  24 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096303	pseudogene	Chr12:23205958-23206065 (+)
129S1/SvImJ	ENSMUSG00200024625	pseudogene	Chr12:14898354-14898461 (-)
129S1/SvImJ	ENSMUSG00200023858	pseudogene	Chr12:16135440-16135547 (+)
A/J	ENSMUSG00195022060	pseudogene	Chr12:15744959-15745066 (-)
A/J	ENSMUSG00195022185	pseudogene	Chr12:14912149-14912256 (-)
AKR/J	ENSMUSG00220028463	pseudogene	Chr12:16220467-16220510 (-)
BALB/cJ	ENSMUSG00180010893	pseudogene	Chr12:15756939-15757046 (-)
BALB/cJ	ENSMUSG00180010916	pseudogene	Chr12:14890740-14890847 (-)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215006093	pseudogene	Chr12:17016688-17016795 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006482	pseudogene	Chr12:14732031-14732138 (-)
CBA/J	ENSMUSG00210007887	pseudogene	Chr12:16232170-16232277 (+)
DBA/2J	ENSMUSG00185003811	pseudogene	Chr12:17366969-17367076 (+)
DBA/2J	ENSMUSG00185004581	pseudogene	Chr12:18345793-18345900 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000007677	pseudogene	Chr12:22121653-22121760 (+)
LP/J	ENSMUSG00230023181	pseudogene	Chr12:17587032-17587139 (-)
LP/J	ENSMUSG00230007368	pseudogene	Chr12:24333686-24333793 (+)
LP/J	ENSMUSG00230007360	pseudogene	Chr12:23607841-23607948 (-)
LP/J	ENSMUSG00230007950	pseudogene	Chr12:22990927-22991034 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225035299	pseudogene	Chr12:24941316-24941423 (-)
NZO/HlLtJ	ENSMUSG00225034411	pseudogene	Chr12:25558221-25558328 (-)
NZO/HlLtJ	ENSMUSG00225035349	pseudogene	Chr12:26140594-26140701 (+)
NZO/HlLtJ	ENSMUSG00225034423	pseudogene	Chr12:26516765-26516872 (+)
NZO/HlLtJ	ENSMUSG00225030387	pseudogene	Chr12:19691614-19691721 (-)
PWK/PhJ	ENSLUMG00010004713	pseudogene	Chr12:16930404-16930511 (+)
PWK/PhJ	ENSLUMG00010005245	pseudogene	Chr12:15475999-15476106 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005001929	pseudogene	Chr12:15914094-15914182 (+)

Homology

• Gene Tree
  Gm47383
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28

• Ensembl
  ENSMUSG00000113085 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113085	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00000220778	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;