Gm47380 Gene Detail

Summary

• Symbol
  Gm47380
• Name
  predicted gene, 47380

• Feature Type
  unclassified gene
• IDs
  MGI:6096298
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:48786212-48786629 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096298	unclassified gene	Chr10:48786212-48786629 (+)
129S1/SvImJ	ENSMUSG00200007690	unclassified gene	Chr10:45679182-45679599 (+)
A/J	ENSMUSG00195003321	unclassified gene	Chr10:45956911-45957328 (+)
AKR/J	ENSMUSG00220006842	unclassified gene	Chr10:45638136-45638553 (+)
BALB/cJ	ENSMUSG00180012716	unclassified gene	Chr10:46064816-46065233 (+)
C3H/HeJ	ENSMUSG00175010663	unclassified gene	Chr10:45828109-45828526 (+)
C57BL/6NJ	ENSMUSG00215002464	unclassified gene	Chr10:45583585-45584002 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008907	unclassified gene	Chr10:45821034-45821449 (+)
CBA/J	ENSMUSG00210008505	unclassified gene	Chr10:45731209-45731626 (+)
DBA/2J	ENSMUSG00185003301	unclassified gene	Chr10:45887366-45887783 (+)
FVB/NJ	ENSMUSG00205005498	unclassified gene	Chr10:45792226-45792643 (+)
JF1/MsJ	ENSUMUG00000030173	unclassified gene	Chr10:45580959-45581375 (+)
JF1/MsJ	ENSUMUG00000048335	unclassified gene	Chr8:843270-843676 (-)
LP/J	ENSMUSG00230006593	unclassified gene	Chr10:47689131-47689548 (+)
NOD/ShiLtJ	ENSMUSG00190005737	unclassified gene	Chr10:46042144-46042561 (+)
NZO/HlLtJ	ENSMUSG00225022956	unclassified gene	Chr10:51970065-51970482 (+)
PWK/PhJ	ENSLUMG00010005079	unclassified gene	Chr10:45683517-45683934 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005015174	unclassified gene	Chr10:45647463-45647880 (+)

Homology

• Gene Tree
  Gm47380
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000111486 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111486	Ensembl Gene Model | MGI Sequence Detail	418	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;