Gm47364 Pseudogene Detail

Summary

• Symbol
  Gm47364
• Name
  predicted gene, 47364

• Feature Type
  pseudogene
• IDs
  MGI:6096273
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:48558786-48559069 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096273	pseudogene	Chr10:48558786-48559069 (+)
129S1/SvImJ	ENSMUSG00200007292	pseudogene	Chr10:45433549-45433832 (+)
A/J	ENSMUSG00195003223	pseudogene	Chr10:45727496-45727779 (+)
A/J	ENSMUSG00195039924	pseudogene	Chr17:18964553-18964836 (-)
AKR/J	ENSMUSG00220000973	pseudogene	Chr3:33104465-33104748 (+)
AKR/J	ENSMUSG00220006749	pseudogene	Chr10:45401599-45401882 (+)
BALB/cJ	ENSMUSG00180012070	pseudogene	Chr10:45833766-45834049 (+)
C3H/HeJ	ENSMUSG00175010222	pseudogene	Chr10:45598786-45599069 (+)
C57BL/6NJ	ENSMUSG00215002449	pseudogene	Chr10:45354172-45354455 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008763	pseudogene	Chr10:45584902-45585167 (+)
CBA/J	ENSMUSG00210017386	pseudogene	Chr13:115082933-115083216 (+)
CBA/J	ENSMUSG00210008549	pseudogene	Chr10:45501809-45502092 (+)
DBA/2J	ENSMUSG00185003393	pseudogene	Chr10:45659425-45659708 (+)
DBA/2J	ENSMUSG00185042467	pseudogene	Chr17:20060983-20061266 (-)
DBA/2J	ENSMUSG00185031433	pseudogene	Chr13:118925176-118925459 (-)
FVB/NJ	ENSMUSG00205001359	pseudogene	Chr13:114552957-114553240 (-)
FVB/NJ	ENSMUSG00205004987	pseudogene	Chr10:45568065-45568348 (+)
JF1/MsJ	ENSUMUG00000028665	pseudogene	Chr10:45353928-45354116 (+)
LP/J	ENSMUSG00230006543	pseudogene	Chr10:47457885-47458168 (+)
NOD/ShiLtJ	ENSMUSG00190005530	pseudogene	Chr10:45807183-45807466 (+)
NZO/HlLtJ	ENSMUSG00225031648	pseudogene	Chr13:121120241-121120524 (+)
NZO/HlLtJ	ENSMUSG00225022895	pseudogene	Chr10:51740692-51740975 (+)
NZO/HlLtJ	ENSMUSG00225054868	pseudogene	Chr17:23381950-23382233 (-)
PWK/PhJ	ENSLUMG00010004896	pseudogene	Chr10:45457152-45457340 (+)
SPRET/EiJ	ENSMSPG00010013161	pseudogene	Chr10:46613909-46614193 (+)
WSB/EiJ	ENSIUOG00005015270	pseudogene	Chr10:45398712-45398995 (+)

Homology

• Gene Tree
  Gm47364
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28

• Ensembl
  ENSMUSG00000111581 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111581	Ensembl Gene Model | MGI Sequence Detail	284	C57BL/6J
transcript	ENSMUST00000214448	Ensembl | MGI Sequence Detail	284	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;