Gm47352 Gene Detail

Summary

• Symbol
  Gm47352
• Name
  predicted gene, 47352

• Feature Type
  lncRNA gene
• IDs
  MGI:6096254
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:39755107-39883475 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3913 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096254	lncRNA gene	Chr13:39755107-39883475 (+)
129S1/SvImJ	ENSMUSG00200013797	lncRNA gene	Chr13:37004209-37132090 (+)
A/J	ENSMUSG00195035740	lncRNA gene	Chr13:36084219-36212115 (+)
AKR/J	ENSMUSG00220033504	lncRNA gene	Chr13:35870831-35998723 (+)
BALB/cJ	ENSMUSG00180008477	lncRNA gene	Chr13:36389733-36517606 (+)
C3H/HeJ	ENSMUSG00175014062	lncRNA gene	Chr13:36342268-36470139 (+)
C57BL/6NJ	ENSMUSG00215015577	lncRNA gene	Chr13:36490846-36618758 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037709	lncRNA gene	Chr13:36441733-36561783 (+)
CBA/J	ENSMUSG00210011854	lncRNA gene	Chr13:36360408-36488288 (+)
DBA/2J	ENSMUSG00185035191	lncRNA gene	Chr13:37158678-37286551 (+)
FVB/NJ	ENSMUSG00205032407	lncRNA gene	Chr13:36035899-36163783 (+)
JF1/MsJ	ENSUMUG00000040066	lncRNA gene	Chr13:36721235-36853040 (+)
LP/J	ENSMUSG00230017129	lncRNA gene	Chr13:46492731-46620579 (+)
NOD/ShiLtJ	ENSMUSG00190013683	lncRNA gene	Chr13:36554595-36682439 (+)
NZO/HlLtJ	ENSMUSG00225035538	lncRNA gene	Chr13:40288428-40411727 (+)
PWK/PhJ	ENSLUMG00010030225	lncRNA gene	Chr13:35568593-35688819 (+)
SPRET/EiJ	ENSMSPG00010011734	lncRNA gene	Chr13:35554030-35681336 (+)
WSB/EiJ	ENSIUOG00005028943	lncRNA gene	Chr13:35697748-35820902 (+)

Homology

• Gene Tree
  Gm47352
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000114841 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114841	Ensembl Gene Model | MGI Sequence Detail	128369	C57BL/6J
transcript	ENSMUST00000224834	Ensembl | MGI Sequence Detail	1545	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;