Gm47332 Pseudogene Detail

Summary

• Symbol
  Gm47332
• Name
  predicted gene, 47332

• Feature Type
  pseudogene
• IDs
  MGI:6096220
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:47849527-47849792 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  177 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096220	pseudogene	Chr10:47849527-47849792 (+)
129S1/SvImJ	ENSMUSG00200007640	pseudogene	Chr10:44721629-44721894 (+)
A/J	ENSMUSG00195003028	pseudogene	Chr10:45018211-45018476 (+)
AKR/J	ENSMUSG00220006143	pseudogene	Chr10:44653395-44653660 (+)
BALB/cJ	ENSMUSG00180011885	pseudogene	Chr10:45089877-45090142 (+)
C3H/HeJ	ENSMUSG00175010196	pseudogene	Chr10:44889533-44889798 (+)
C57BL/6NJ	ENSMUSG00215002412	pseudogene	Chr10:44644845-44645110 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008701	pseudogene	Chr10:44922819-44923087 (+)
CBA/J	ENSMUSG00210008736	pseudogene	Chr10:44792563-44792828 (+)
DBA/2J	ENSMUSG00185003463	pseudogene	Chr10:44950339-44950604 (+)
FVB/NJ	ENSMUSG00205005172	pseudogene	Chr10:44866445-44866710 (+)
JF1/MsJ	ENSUMUG00000027604	pseudogene	Chr10:44650385-44650646 (+)
LP/J	ENSMUSG00230006461	pseudogene	Chr10:46745998-46746263 (+)
NOD/ShiLtJ	ENSMUSG00190005591	pseudogene	Chr10:45097930-45098195 (+)
NZO/HlLtJ	ENSMUSG00225018511	pseudogene	Chr10:51031464-51031729 (+)
PWK/PhJ	ENSLUMG00010004745	pseudogene	Chr10:44746174-44746435 (+)
SPRET/EiJ	ENSMSPG00010012920	pseudogene	Chr10:45900894-45901162 (+)
WSB/EiJ	ENSIUOG00005015023	pseudogene	Chr10:44647552-44647817 (+)

Homology

• Gene Tree
  Gm47332
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000111911 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111911	Ensembl Gene Model | MGI Sequence Detail	266	C57BL/6J
transcript	ENSMUST00000218907	Ensembl | MGI Sequence Detail	266	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;