Gm47323 Pseudogene Detail

Summary

• Symbol
  Gm47323
• Name
  predicted gene, 47323

• Feature Type
  pseudogene
• IDs
  MGI:6096208
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:12175640-12175850 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096208	pseudogene	Chr13:12175640-12175850 (+)
129S1/SvImJ	ENSMUSG00200007214	pseudogene	Chr13:9425712-9425922 (+)
A/J	ENSMUSG00195013554	pseudogene	Chr13:8758528-8758738 (+)
AKR/J	ENSMUSG00220013627	pseudogene	Chr13:9018033-9018243 (+)
BALB/cJ	ENSMUSG00180009706	pseudogene	Chr13:9185486-9185696 (+)
C3H/HeJ	ENSMUSG00175008764	pseudogene	Chr13:9218176-9218386 (+)
C57BL/6NJ	ENSMUSG00215021258	pseudogene	Chr13:9481828-9482038 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025810	pseudogene	Chr13:9395390-9395600 (+)
CBA/J	ENSMUSG00210023237	pseudogene	Chr13:8739665-8739875 (+)
DBA/2J	ENSMUSG00185025556	pseudogene	Chr13:9428809-9429019 (+)
FVB/NJ	ENSMUSG00205027498	pseudogene	Chr13:9218868-9219078 (+)
JF1/MsJ	ENSUMUG00000012946	pseudogene	Chr13:9469095-9469305 (+)
LP/J	ENSMUSG00230007940	pseudogene	Chr13:18916171-18916381 (+)
NOD/ShiLtJ	ENSMUSG00190013305	pseudogene	Chr13:8877554-8877764 (+)
NZO/HlLtJ	ENSMUSG00225032782	pseudogene	Chr13:12811674-12811884 (+)
PWK/PhJ	ENSLUMG00010017691	pseudogene	Chr13:8814588-8814798 (+)
SPRET/EiJ	ENSMSPG00010024441	pseudogene	Chr13:8843795-8844005 (+)
WSB/EiJ	ENSIUOG00005022444	pseudogene	Chr13:8665026-8665236 (+)

Homology

• Gene Tree
  Gm47323
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000113347 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113347	Ensembl Gene Model | MGI Sequence Detail	211	C57BL/6J
transcript	ENSMUST00000220496	Ensembl | MGI Sequence Detail	211	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;