Gm47264 Pseudogene Detail

Summary

• Symbol
  Gm47264
• Name
  predicted gene, 47264

• Feature Type
  pseudogene
• IDs
  MGI:6096099
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:65492941-65493096 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  15 from dbSNP Build 142
• Strain Annotations
  34

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096099	pseudogene	Chr13:65492941-65493096 (+)
129S1/SvImJ	ENSMUSG00200013773	pseudogene	Chr13:61596782-61596937 (+)
A/J	ENSMUSG00195031534	pseudogene	Chr13:61760731-61760886 (+)
AKR/J	ENSMUSG00220041897	pseudogene	Chr13:63824374-63824529 (-)
AKR/J	ENSMUSG00220037651	pseudogene	Chr13:60841754-60841909 (+)
BALB/cJ	ENSMUSG00180028797	pseudogene	Chr13:62060217-62060372 (+)
C3H/HeJ	ENSMUSG00175008284	pseudogene	Chr13:61888247-61888402 (+)
C57BL/6NJ	ENSMUSG00215015638	pseudogene	Chr13:61904732-61904887 (+)
C57BL/6NJ	ENSMUSG00215015775	pseudogene	Chr13:62045359-62045514 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012291	pseudogene	Chr13:62246675-62246830 (+)
CAST/EiJ	ENSTCUG00005012312	pseudogene	Chr13:62412302-62412457 (-)
CBA/J	ENSMUSG00210009840	pseudogene	Chr13:62087716-62087871 (+)
DBA/2J	ENSMUSG00185010089	pseudogene	Chr13:62918193-62918348 (+)
FVB/NJ	ENSMUSG00205030046	pseudogene	Chr13:61378135-61378290 (+)
JF1/MsJ	ENSUMUG00000044050	pseudogene	Chr13:63993773-63993923 (-)
JF1/MsJ	ENSUMUG00000043453	pseudogene	Chr13:63376307-63376457 (-)
JF1/MsJ	ENSUMUG00000043071	pseudogene	Chr13:62987806-62987961 (+)
JF1/MsJ	ENSUMUG00000035379	pseudogene	Chr13:62563411-62563566 (+)
JF1/MsJ	ENSUMUG00000041754	pseudogene	Chr13:64378831-64378986 (-)
LP/J	ENSMUSG00230035726	pseudogene	Chr13:73807796-73807951 (+)
LP/J	ENSMUSG00230036491	pseudogene	Chr13:73598232-73598387 (-)
LP/J	ENSMUSG00230035633	pseudogene	Chr13:73311885-73312040 (+)
LP/J	ENSMUSG00230035503	pseudogene	Chr13:72940583-72940738 (+)
LP/J	ENSMUSG00230035084	pseudogene	Chr13:74267112-74267267 (+)
NOD/ShiLtJ	ENSMUSG00190040091	pseudogene	Chr13:61827433-61827588 (+)
NZO/HlLtJ	ENSMUSG00225048207	pseudogene	Chr13:65979340-65979495 (+)
NZO/HlLtJ	ENSMUSG00225048636	pseudogene	Chr13:66047851-66048006 (+)
PWK/PhJ	ENSLUMG00010011813	pseudogene	Chr13:61374390-61374545 (+)
PWK/PhJ	ENSLUMG00010013433	pseudogene	Chr13:61434889-61435041 (-)
SPRET/EiJ	ENSMSPG00010036217	pseudogene	Chr13:61864143-61864298 (+)
WSB/EiJ	ENSIUOG00005025403	pseudogene	Chr13:60568514-60568669 (-)
WSB/EiJ	ENSIUOG00005022205	pseudogene	Chr13:61081864-61082019 (+)
WSB/EiJ	ENSIUOG00005022199	pseudogene	Chr13:60538706-60538861 (+)
WSB/EiJ	ENSIUOG00005022179	pseudogene	Chr13:60970921-60971075 (-)

Homology

• Gene Tree
  Gm47264
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36

• Ensembl
  ENSMUSG00000114142 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114142	Ensembl Gene Model | MGI Sequence Detail	156	C57BL/6J
transcript	ENSMUST00000222824	Ensembl | MGI Sequence Detail	156	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;