Gm47256 Pseudogene Detail

Summary

• Symbol
  Gm47256
• Name
  predicted gene, 47256

• Feature Type
  pseudogene
• IDs
  MGI:6096086
  NCBI Gene: 115488293
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:69112284-69112578 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096086	pseudogene	Chr14:69111441-69112578 (+)
129S1/SvImJ	ENSMUSG00200030413	pseudogene	Chr14:57714502-57714796 (+)
A/J	ENSMUSG00195016106	pseudogene	Chr14:57903388-57903682 (+)
AKR/J	ENSMUSG00220034478	pseudogene	Chr14:57239094-57239388 (+)
BALB/cJ	ENSMUSG00180035725	pseudogene	Chr14:57512003-57512297 (+)
C3H/HeJ	ENSMUSG00175037337	pseudogene	Chr14:59272512-59272806 (+)
C57BL/6NJ	ENSMUSG00215032098	pseudogene	Chr14:57448635-57448929 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040076	pseudogene	Chr14:59134843-59135131 (+)
CBA/J	ENSMUSG00210040571	pseudogene	Chr14:57888432-57888726 (+)
DBA/2J	ENSMUSG00185023777	pseudogene	Chr14:63057947-63058241 (+)
FVB/NJ	ENSMUSG00205038619	pseudogene	Chr14:57397808-57398102 (+)
JF1/MsJ	ENSUMUG00000042821	pseudogene	Chr14:74224890-74225184 (+)
LP/J	ENSMUSG00230017095	pseudogene	Chr14:75078325-75078619 (+)
NOD/ShiLtJ	ENSMUSG00190040777	pseudogene	Chr14:57683181-57683475 (+)
NZO/HlLtJ	ENSMUSG00225040294	pseudogene	Chr14:65410474-65410768 (+)
PWK/PhJ	ENSLUMG00010038946	pseudogene	Chr14:57083621-57083915 (+)
SPRET/EiJ	ENSMSPG00010036233	pseudogene	Chr14:60609589-60609877 (+)
WSB/EiJ	ENSIUOG00005040987	pseudogene	Chr14:57123334-57123664 (+)

Homology

• Gene Tree
  Gm47256
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000114679 (Evidence)
• NCBI Gene
  115488293

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114679	Ensembl Gene Model | MGI Sequence Detail	295	C57BL/6J
transcript	ENSMUST00000225801	Ensembl | MGI Sequence Detail	295	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;