Gm47212 Gene Detail

Summary

• Symbol
  Gm47212
• Name
  predicted gene, 47212

• Feature Type
  lncRNA gene
• IDs
  MGI:6096017
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:68455662-68461260 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  326 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6096017	lncRNA gene	Chr14:68455662-68461260 (+)
129S1/SvImJ	ENSMUSG00200031273	lncRNA gene	Chr14:57073269-57078828 (+)
A/J	ENSMUSG00195015710	lncRNA gene	Chr14:57242347-57247877 (+)
AKR/J	ENSMUSG00220034002	lncRNA gene	Chr14:56582944-56588473 (+)
BALB/cJ	ENSMUSG00180036616	lncRNA gene	Chr14:56858497-56864026 (+)
C3H/HeJ	ENSMUSG00175039232	lncRNA gene	Chr14:58609771-58615329 (+)
C57BL/6NJ	ENSMUSG00215029395	lncRNA gene	Chr14:56791088-56796648 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039068	lncRNA gene	Chr14:58515170-58520727 (+)
CBA/J	ENSMUSG00210042383	lncRNA gene	Chr14:57230957-57236486 (+)
DBA/2J	ENSMUSG00185023758	lncRNA gene	Chr14:62407601-62413168 (+)
FVB/NJ	ENSMUSG00205036465	lncRNA gene	Chr14:56745097-56750627 (+)
JF1/MsJ	ENSUMUG00000043209	lncRNA gene	Chr14:73583178-73588748 (+)
LP/J	ENSMUSG00230016899	lncRNA gene	Chr14:74436697-74442247 (+)
NOD/ShiLtJ	ENSMUSG00190040620	lncRNA gene	Chr14:57024141-57029674 (+)
NZO/HlLtJ	ENSMUSG00225040205	lncRNA gene	Chr14:64756957-64762490 (+)
PWK/PhJ	ENSLUMG00010038416	lncRNA gene	Chr14:56462355-56467899 (+)
SPRET/EiJ	ENSMSPG00010036890	lncRNA gene	Chr14:59954287-59959861 (+)
WSB/EiJ	ENSIUOG00005042107	lncRNA gene	Chr14:56478409-56483932 (+)

Homology

• Gene Tree
  Gm47212
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25

• Ensembl
  ENSMUSG00000114925 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114925	Ensembl Gene Model | MGI Sequence Detail	5599	C57BL/6J
transcript	ENSMUST00000325155	Ensembl | MGI Sequence Detail	2030	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;