Gm47175 Gene Detail

Summary

• Symbol
  Gm47175
• Name
  predicted gene, 47175

• Feature Type
  unclassified gene
• IDs
  MGI:6095958
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:56412109-56413945 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6095958	unclassified gene	Chr9:56412109-56413945 (-)
129S1/SvImJ	ENSMUSG00200036535	unclassified gene	Chr9:53526857-53528698 (-)
A/J	ENSMUSG00195042995	unclassified gene	Chr9:53225476-53227319 (-)
AKR/J	ENSMUSG00220031728	unclassified gene	Chr9:53362713-53364556 (-)
BALB/cJ	ENSMUSG00180021187	unclassified gene	Chr9:53351344-53353181 (-)
C3H/HeJ	ENSMUSG00175021987	unclassified gene	Chr9:53352364-53354206 (-)
C57BL/6NJ	ENSMUSG00215033375	unclassified gene	Chr9:53344705-53346541 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021194	unclassified gene	Chr9:53242779-53244613 (-)
CBA/J	ENSMUSG00210041897	unclassified gene	Chr9:53453877-53455714 (-)
DBA/2J	ENSMUSG00185044881	unclassified gene	Chr9:53482873-53484714 (-)
FVB/NJ	ENSMUSG00205042248	unclassified gene	Chr9:53795305-53797143 (-)
JF1/MsJ	ENSUMUG00000050649	unclassified gene	Chr9:53503407-53505236 (-)
LP/J	ENSMUSG00230039128	unclassified gene	Chr9:53726798-53728639 (-)
NOD/ShiLtJ	ENSMUSG00190044650	unclassified gene	Chr9:53550703-53552541 (-)
NZO/HlLtJ	ENSMUSG00225028602	unclassified gene	Chr9:53763906-53765744 (-)
PWK/PhJ	ENSLUMG00010041151	unclassified gene	Chr9:53466395-53468236 (-)
SPRET/EiJ	ENSMSPG00010028872	unclassified gene	Chr9:54497166-54499007 (-)
WSB/EiJ	ENSIUOG00005042013	unclassified gene	Chr9:52959345-52961186 (-)

Homology

• Gene Tree
  Gm47175
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000111343 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111343	Ensembl Gene Model | MGI Sequence Detail	1837	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm47175:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr89712	Chr9:56413881-56413888 (-)	60 bp