Gm47145 Pseudogene Detail

Summary

• Symbol
  Gm47145
• Name
  predicted gene, 47145

• Feature Type
  pseudogene
• IDs
  MGI:6095909
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:122747598-122750407 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6095909	pseudogene	Chr9:122747598-122750407 (+)
129S1/SvImJ	ENSMUSG00200031880	pseudogene	Chr9:119875227-119878036 (+)
A/J	ENSMUSG00195028984	pseudogene	Chr9:119014977-119017786 (+)
AKR/J	ENSMUSG00220019935	pseudogene	Chr9:119486780-119489589 (+)
BALB/cJ	ENSMUSG00180029867	pseudogene	Chr9:119554816-119557625 (+)
C3H/HeJ	ENSMUSG00175019749	pseudogene	Chr9:119791160-119793969 (+)
C57BL/6NJ	ENSMUSG00215036194	pseudogene	Chr9:119710352-119713160 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017122	pseudogene	Chr9:119377862-119380670 (+)
CBA/J	ENSMUSG00210043628	pseudogene	Chr9:119514954-119517879 (+)
DBA/2J	ENSMUSG00185017330	pseudogene	Chr9:119850607-119853532 (+)
FVB/NJ	ENSMUSG00205030000	pseudogene	Chr9:119681546-119684355 (+)
JF1/MsJ	ENSUMUG00000047498	pseudogene	Chr9:119647945-119650820 (+)
LP/J	ENSMUSG00230037832	pseudogene	Chr9:120015378-120018187 (+)
NOD/ShiLtJ	ENSMUSG00190015145	pseudogene	Chr9:119458258-119461067 (+)
NZO/HlLtJ	ENSMUSG00225024041	pseudogene	Chr9:120275696-120278505 (+)
PWK/PhJ	ENSLUMG00010040042	pseudogene	Chr9:119544009-119546878 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005022921	pseudogene	Chr9:118885626-118888551 (+)

Homology

• Gene Tree
  Gm47145
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000111710 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111710	Ensembl Gene Model | MGI Sequence Detail	2810	C57BL/6J
transcript	ENSMUST00000214983	Ensembl | MGI Sequence Detail	2810	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;