Gm47143 Gene Detail

Summary

• Symbol
  Gm47143
• Name
  predicted gene, 47143

• Feature Type
  lncRNA gene
• IDs
  MGI:6095905
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:102473637-102530430 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6095905	lncRNA gene	Chr10:102473637-102530430 (+)
129S1/SvImJ	ENSMUSG00200020289	lncRNA gene	Chr10:99005442-99016747 (+)
A/J	ENSMUSG00195017692	lncRNA gene	Chr10:99437084-99448391 (+)
AKR/J	ENSMUSG00220027240	lncRNA gene	Chr10:99011444-99022908 (+)
BALB/cJ	ENSMUSG00180009693	lncRNA gene	Chr10:99444303-99455612 (+)
C3H/HeJ	ENSMUSG00175006075	lncRNA gene	Chr10:99325637-99336941 (+)
C57BL/6NJ	ENSMUSG00215008862	lncRNA gene	Chr10:99038375-99049680 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006273	lncRNA gene	Chr10:98608928-98620366 (+)
CBA/J	ENSMUSG00210023069	lncRNA gene	Chr10:99216577-99227883 (+)
DBA/2J	ENSMUSG00185019226	lncRNA gene	Chr10:99386516-99397820 (+)
FVB/NJ	ENSMUSG00205003728	lncRNA gene	Chr10:98873208-98884666 (+)
JF1/MsJ	ENSUMUG00000029296	lncRNA gene	Chr10:100809371-100820624 (+)
LP/J	ENSMUSG00230013545	lncRNA gene	Chr10:101304726-101316030 (+)
NOD/ShiLtJ	ENSMUSG00190025970	lncRNA gene	Chr10:99497799-99509248 (+)
NZO/HlLtJ	ENSMUSG00225040858	lncRNA gene	Chr10:105535930-105547232 (+)
PWK/PhJ	ENSLUMG00010005909	lncRNA gene	Chr10:99077265-99090026 (+)
SPRET/EiJ	ENSMSPG00010010419	lncRNA gene	Chr10:100863058-100874327 (+)
WSB/EiJ	ENSIUOG00005013368	lncRNA gene	Chr10:99147465-99158757 (+)

Homology

• Gene Tree
  Gm47143
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30

• Ensembl
  ENSMUSG00000112845 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112845	Ensembl Gene Model | MGI Sequence Detail	56794	C57BL/6J
transcript	ENSMUST00000283311	Ensembl | MGI Sequence Detail	1896	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;