Gm47141 Gene Detail

Summary

• Symbol
  Gm47141
• Name
  predicted gene, 47141

• Feature Type
  lncRNA gene
• IDs
  MGI:6095902
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:46308651-46310251 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  167 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6095902	lncRNA gene	Chr9:46308651-46310251 (+)
129S1/SvImJ	ENSMUSG00200018605	lncRNA gene	Chr9:43394993-43396561 (+)
A/J	ENSMUSG00195024923	lncRNA gene	Chr9:43155031-43156612 (+)
AKR/J	ENSMUSG00220041424	lncRNA gene	Chr9:43234767-43236351 (+)
BALB/cJ	ENSMUSG00180032643	lncRNA gene	Chr9:43266729-43268310 (+)
C3H/HeJ	ENSMUSG00175016085	lncRNA gene	Chr9:43278834-43280415 (+)
C57BL/6NJ	ENSMUSG00215038643	lncRNA gene	Chr9:43228594-43230176 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016237	lncRNA gene	Chr9:43221052-43222633 (+)
CBA/J	ENSMUSG00210017021	lncRNA gene	Chr9:43318419-43319986 (+)
DBA/2J	ENSMUSG00185012445	lncRNA gene	Chr9:43393266-43394847 (+)
FVB/NJ	ENSMUSG00205040765	lncRNA gene	Chr9:43633055-43634636 (+)
JF1/MsJ	ENSUMUG00000043867	lncRNA gene	Chr9:43434548-43436127 (+)
LP/J	ENSMUSG00230042276	lncRNA gene	Chr9:43685208-43686776 (+)
NOD/ShiLtJ	ENSMUSG00190024345	lncRNA gene	Chr9:43471881-43473462 (+)
NZO/HlLtJ	ENSMUSG00225045063	lncRNA gene	Chr9:43644925-43646493 (+)
PWK/PhJ	ENSLUMG00010021442	lncRNA gene	Chr9:43398636-43400216 (+)
SPRET/EiJ	ENSMSPG00010011725	lncRNA gene	Chr9:44150921-44152504 (+)
WSB/EiJ	ENSIUOG00005022946	lncRNA gene	Chr9:42883216-42884784 (+)

Homology

• Gene Tree
  Gm47141
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000110802 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110802	Ensembl Gene Model | MGI Sequence Detail	1601	C57BL/6J
transcript	ENSMUST00000213920	Ensembl | MGI Sequence Detail	999	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;