Gm47110 Pseudogene Detail

Summary

• Symbol
  Gm47110
• Name
  predicted gene, 47110

• Feature Type
  pseudogene
• IDs
  MGI:6095850
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:67607463-67607867 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6095850	pseudogene	Chr9:67607463-67607867 (+)
129S1/SvImJ	ENSMUSG00200044095	pseudogene	Chr9:64701877-64702281 (+)
A/J	ENSMUSG00195027775	pseudogene	Chr9:64442607-64443011 (+)
AKR/J	ENSMUSG00220042467	pseudogene	Chr9:64580586-64580990 (+)
BALB/cJ	ENSMUSG00180018531	pseudogene	Chr9:64562106-64562510 (+)
C3H/HeJ	ENSMUSG00175013189	pseudogene	Chr9:64575740-64576144 (+)
C57BL/6NJ	ENSMUSG00215036123	pseudogene	Chr9:64550011-64550415 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031868	pseudogene	Chr9:64449791-64450269 (+)
CBA/J	ENSMUSG00210014623	pseudogene	Chr9:64648782-64649186 (+)
DBA/2J	ENSMUSG00185034801	pseudogene	Chr9:64673793-64674197 (+)
FVB/NJ	ENSMUSG00205035344	pseudogene	Chr9:64986038-64986442 (+)
JF1/MsJ	ENSUMUG00000042596	pseudogene	Chr9:64747314-64747718 (+)
LP/J	ENSMUSG00230027359	pseudogene	Chr9:64900934-64901338 (+)
NOD/ShiLtJ	ENSMUSG00190024604	pseudogene	Chr9:64773883-64774287 (+)
NZO/HlLtJ	ENSMUSG00225046396	pseudogene	Chr9:64973371-64973775 (+)
PWK/PhJ	ENSLUMG00010027918	pseudogene	Chr9:64702828-64703232 (+)
SPRET/EiJ	ENSMSPG00010022842	pseudogene	Chr9:65763368-65763755 (+)
WSB/EiJ	ENSIUOG00005028351	pseudogene	Chr9:64155947-64156351 (+)

Homology

• Gene Tree
  Gm47110
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000111819 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111819	Ensembl Gene Model | MGI Sequence Detail	405	C57BL/6J
transcript	ENSMUST00000216655	Ensembl | MGI Sequence Detail	405	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;