Gm47101 Gene Detail

Summary

• Symbol
  Gm47101
• Name
  predicted gene, 47101

• Feature Type
  lncRNA gene
• IDs
  MGI:6095836
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:102271130-102271404 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  47

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6095836	lncRNA gene	Chr10:102271130-102271404 (+)
129S1/SvImJ	ENSMUSG00200001094	lncRNA gene	Chr3:6991764-6992038 (-)
129S1/SvImJ	ENSMUSG00200020301	lncRNA gene	Chr10:98757429-98757703 (+)
129S1/SvImJ	ENSMUSG00200020158	lncRNA gene	Chr18:15979953-15980227 (-)
129S1/SvImJ	ENSMUSG00200027544	lncRNA gene	Chr7:22423102-22423376 (+)
A/J	ENSMUSG00195051694	lncRNA gene	Chr7:39416256-39416530 (-)
A/J	ENSMUSG00195040841	lncRNA gene	Chr13:21480042-21480316 (+)
A/J	ENSMUSG00195017796	lncRNA gene	Chr10:99189023-99189297 (+)
A/J	ENSMUSG00195040824	lncRNA gene	Chr13:21472047-21472321 (+)
A/J	ENSMUSG00195001283	lncRNA gene	Chr3:7332688-7332962 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180046301	lncRNA gene	Chr7:36292234-36292508 (-)
BALB/cJ	ENSMUSG00180025227	lncRNA gene	Chr7:22939706-22939980 (+)
BALB/cJ	ENSMUSG00180007534	lncRNA gene	Chr3:7354765-7355039 (-)
BALB/cJ	ENSMUSG00180004270	lncRNA gene	Chr18:16579992-16580266 (-)
BALB/cJ	ENSMUSG00180010238	lncRNA gene	Chr10:99196259-99196533 (+)
BALB/cJ	ENSMUSG00180043987	lncRNA gene	Chr6:64690452-64690726 (+)
C3H/HeJ	ENSMUSG00175005258	lncRNA gene	Chr3:7341052-7341326 (-)
C3H/HeJ	ENSMUSG00175046674	lncRNA gene	Chr7:36873548-36873822 (-)
C3H/HeJ	ENSMUSG00175004629	lncRNA gene	Chr18:16106264-16106538 (-)
C3H/HeJ	ENSMUSG00175006131	lncRNA gene	Chr10:99077635-99077909 (+)
C3H/HeJ	ENSMUSG00175045674	lncRNA gene	Chr7:23474414-23474688 (+)
C57BL/6NJ	ENSMUSG00215003786	lncRNA gene	Chr18:15819328-15819602 (-)
C57BL/6NJ	ENSMUSG00215005852	lncRNA gene	Chr3:7347955-7348229 (-)
C57BL/6NJ	ENSMUSG00215045275	lncRNA gene	Chr6:64665030-64665304 (+)
C57BL/6NJ	ENSMUSG00215007584	lncRNA gene	Chr10:98790323-98790597 (+)
C57BL/6NJ	ENSMUSG00215033905	lncRNA gene	Chr7:22828498-22828772 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210020740	lncRNA gene	Chr18:16132438-16132712 (-)
CBA/J	ENSMUSG00210001032	lncRNA gene	Chr3:7326197-7326471 (-)
CBA/J	ENSMUSG00210028680	lncRNA gene	Chr7:23493808-23494082 (+)
CBA/J	ENSMUSG00210023083	lncRNA gene	Chr10:98968562-98968836 (+)
CBA/J	ENSMUSG00210050502	lncRNA gene	Chr7:37175080-37175354 (-)
DBA/2J	ENSMUSG00185029370	lncRNA gene	Chr7:41083111-41083385 (-)
DBA/2J	ENSMUSG00185000606	lncRNA gene	Chr3:7325659-7325933 (-)
DBA/2J	ENSMUSG00185051167	lncRNA gene	Chr4:107584220-107584493 (-)
DBA/2J	ENSMUSG00185019344	lncRNA gene	Chr10:99138486-99138760 (+)
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	ENSMUSG00230000277	lncRNA gene	Chr3:9243712-9243986 (-)
LP/J	ENSMUSG00230052011	lncRNA gene	Chr7:46603591-46603865 (-)
LP/J	ENSMUSG00230022170	lncRNA gene	Chr13:31900902-31901176 (+)
LP/J	ENSMUSG00230052012	lncRNA gene	Chr7:46611571-46611845 (-)
LP/J	ENSMUSG00230022177	lncRNA gene	Chr13:31908896-31909170 (+)
LP/J	ENSMUSG00230013654	lncRNA gene	Chr10:101056690-101056964 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225028363	lncRNA gene	Chr18:18095072-18095346 (-)
NZO/HlLtJ	ENSMUSG00225021225	lncRNA gene	Chr7:44710526-44710800 (-)
NZO/HlLtJ	ENSMUSG00225001154	lncRNA gene	Chr3:11816298-11816572 (-)
NZO/HlLtJ	ENSMUSG00225041024	lncRNA gene	Chr10:105287888-105288162 (+)
NZO/HlLtJ	ENSMUSG00225046882	lncRNA gene	Chr13:25687213-25687487 (+)
NZO/HlLtJ	ENSMUSG00225046888	lncRNA gene	Chr13:25695207-25695481 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm47101
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  49

• Ensembl
  ENSMUSG00000112073 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112073	Ensembl Gene Model | MGI Sequence Detail	275	C57BL/6J
transcript	ENSMUST00000219113	Ensembl | MGI Sequence Detail	275	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;