Gm47062 Pseudogene Detail

Summary

• Symbol
  Gm47062
• Name
  predicted gene, 47062

• Feature Type
  pseudogene
• IDs
  MGI:6095773
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:120409201-120411804 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  221 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6095773	pseudogene	Chr9:120409201-120411804 (+)
129S1/SvImJ	ENSMUSG00200032422	pseudogene	Chr9:117531870-117534478 (+)
A/J	ENSMUSG00195028219	pseudogene	Chr9:116707007-116709613 (+)
AKR/J	ENSMUSG00220019762	pseudogene	Chr9:117167692-117170295 (+)
BALB/cJ	ENSMUSG00180030045	pseudogene	Chr9:117244254-117246851 (+)
C3H/HeJ	ENSMUSG00175020114	pseudogene	Chr9:117487523-117490128 (+)
C57BL/6NJ	ENSMUSG00215033168	pseudogene	Chr9:117363167-117365771 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017075	pseudogene	Chr9:117112579-117115160 (+)
CBA/J	ENSMUSG00210040818	pseudogene	Chr9:117206519-117209122 (+)
DBA/2J	ENSMUSG00185017905	pseudogene	Chr9:117540756-117543360 (+)
FVB/NJ	ENSMUSG00205031975	pseudogene	Chr9:117375751-117378358 (+)
JF1/MsJ	ENSUMUG00000051972	pseudogene	Chr9:117395083-117397667 (+)
LP/J	ENSMUSG00230038382	pseudogene	Chr9:117660157-117662760 (+)
NOD/ShiLtJ	ENSMUSG00190015000	pseudogene	Chr9:117141544-117144149 (+)
NZO/HlLtJ	ENSMUSG00225023918	pseudogene	Chr9:117924724-117927331 (+)
PWK/PhJ	ENSLUMG00010038095	pseudogene	Chr9:117283306-117285889 (+)
SPRET/EiJ	ENSMSPG00010026191	pseudogene	Chr9:118983905-118986495 (+)
WSB/EiJ	ENSIUOG00005022031	pseudogene	Chr9:116589684-116592286 (+)

Homology

• Gene Tree
  Gm47062
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000110962 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110962	Ensembl Gene Model | MGI Sequence Detail	2604	C57BL/6J
transcript	ENSMUST00000213466	Ensembl | MGI Sequence Detail	1078	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;