Gm47028 Gene Detail

Summary

• Symbol
  Gm47028
• Name
  predicted gene, 47028

• Feature Type
  lncRNA gene
• IDs
  MGI:6095721
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:71356273-71363618 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  227 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6095721	lncRNA gene	Chr10:71356273-71363618 (-)
129S1/SvImJ	ENSMUSG00200017665	lncRNA gene	Chr10:68051278-68053133 (-)
A/J	ENSMUSG00195006293	lncRNA gene	Chr10:68348672-68350527 (-)
AKR/J	ENSMUSG00220029804	lncRNA gene	Chr10:68017387-68019242 (-)
BALB/cJ	ENSMUSG00180007891	lncRNA gene	Chr10:68383099-68384954 (-)
C3H/HeJ	ENSMUSG00175012968	lncRNA gene	Chr10:68223875-68225730 (-)
C57BL/6NJ	ENSMUSG00215004152	lncRNA gene	Chr10:67992476-67994331 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027474	lncRNA gene	Chr10:67928436-67930289 (-)
CBA/J	ENSMUSG00210009831	lncRNA gene	Chr10:68098519-68100374 (-)
DBA/2J	ENSMUSG00185021046	lncRNA gene	Chr10:68453450-68455305 (-)
FVB/NJ	ENSMUSG00205007885	lncRNA gene	Chr10:68189321-68191176 (-)
JF1/MsJ	ENSUMUG00000023344	lncRNA gene	Chr10:69617593-69619443 (-)
LP/J	ENSMUSG00230019764	lncRNA gene	Chr10:70223416-70225271 (-)
NOD/ShiLtJ	ENSMUSG00190008082	lncRNA gene	Chr10:68447840-68449695 (-)
NZO/HlLtJ	ENSMUSG00225048660	lncRNA gene	Chr10:74519621-74521476 (-)
PWK/PhJ	ENSLUMG00010008000	lncRNA gene	Chr10:68033531-68035386 (-)
SPRET/EiJ	ENSMSPG00010024280	lncRNA gene	Chr10:69724100-69725954 (-)
WSB/EiJ	ENSIUOG00005034139	lncRNA gene	Chr10:67955717-67957572 (-)

Homology

• Gene Tree
  Gm47028
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000112416 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112416	Ensembl Gene Model | MGI Sequence Detail	7346	C57BL/6J
transcript	ENSMUST00000218284	Ensembl | MGI Sequence Detail	1255	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;