Gm46633 Gene Detail

Summary

• Symbol
  Gm46633
• Name
  predicted gene, 46633

• Feature Type
  lncRNA gene
• IDs
  MGI:5826270
  NCBI Gene: 108168391
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:7004867-7064794 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1425 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5826270	lncRNA gene	Chr18:7004867-7066322 (+)
129S1/SvImJ	ENSMUSG00200025277	lncRNA gene	Chr18:3929720-3931161 (+)
A/J	ENSMUSG00195009511	lncRNA gene	Chr18:4117323-4118765 (+)
AKR/J	ENSMUSG00220020002	lncRNA gene	Chr18:4122095-4123536 (+)
BALB/cJ	ENSMUSG00180005431	lncRNA gene	Chr18:4585518-4586962 (+)
C3H/HeJ	ENSMUSG00175008031	lncRNA gene	Chr18:4120931-4122375 (+)
C57BL/6NJ	ENSMUSG00215021867	lncRNA gene	Chr18:3838127-3839569 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017766	lncRNA gene	Chr18:4034655-4036097 (+)
CBA/J	ENSMUSG00210021936	lncRNA gene	Chr18:4127746-4129190 (+)
DBA/2J	ENSMUSG00185030198	lncRNA gene	Chr18:4117037-4118479 (+)
FVB/NJ	ENSMUSG00205035655	lncRNA gene	Chr18:3898126-3899568 (+)
JF1/MsJ	ENSUMUG00000040989	lncRNA gene	Chr18:4205687-4207131 (+)
LP/J	ENSMUSG00230028404	lncRNA gene	Chr18:6179590-6181031 (+)
NOD/ShiLtJ	ENSMUSG00190010476	lncRNA gene	Chr18:3889719-3891161 (+)
NZO/HlLtJ	ENSMUSG00225034469	lncRNA gene	Chr18:6100134-6101576 (+)
PWK/PhJ	ENSLUMG00010010088	lncRNA gene	Chr18:4370672-4372114 (+)
SPRET/EiJ	ENSMSPG00010012259	lncRNA gene	Chr18:4025491-4026931 (+)
WSB/EiJ	ENSIUOG00005028080	lncRNA gene	Chr18:3966136-3967578 (+)

Homology

• Gene Tree
  Gm46633
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000117356 (Evidence)
• NCBI Gene
  108168391

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117356	Ensembl Gene Model | MGI Sequence Detail	59928	C57BL/6J
transcript	ENSMUST00000341159	Ensembl | MGI Sequence Detail	1785	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;