Gm46610 Pseudogene Detail

Summary

• Symbol
  Gm46610
• Name
  predicted gene, 46610

• Feature Type
  pseudogene
• IDs
  MGI:5826247
  NCBI Gene: 108168360
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:16540654-16541069 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5826247	pseudogene	Chr17:16540654-16541362 (-)
129S1/SvImJ	ENSMUSG00200038391	pseudogene	Chr17:12170704-12171287 (-)
A/J	ENSMUSG00195038101	pseudogene	Chr17:12924489-12925072 (-)
AKR/J	ENSMUSG00220026289	pseudogene	Chr17:12587767-12588350 (-)
BALB/cJ	ENSMUSG00180017593	pseudogene	Chr17:12163526-12164109 (-)
C3H/HeJ	ENSMUSG00175042214	pseudogene	Chr17:12057689-12058272 (-)
C57BL/6NJ	ENSMUSG00215042676	pseudogene	Chr17:12249180-12249763 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023314	pseudogene	Chr17:12546403-12546986 (-)
CBA/J	ENSMUSG00210042116	pseudogene	Chr17:11901698-11902281 (-)
DBA/2J	ENSMUSG00185039340	pseudogene	Chr17:13891647-13892230 (-)
FVB/NJ	ENSMUSG00205032405	pseudogene	Chr17:12554500-12555083 (-)
JF1/MsJ	ENSUMUG00000041983	pseudogene	Chr17:13449711-13450294 (-)
LP/J	ENSMUSG00230028151	pseudogene	Chr17:15289892-15290475 (-)
NOD/ShiLtJ	ENSMUSG00190038304	pseudogene	Chr17:12314613-12315196 (-)
NZO/HlLtJ	ENSMUSG00225048849	pseudogene	Chr17:17243481-17244064 (-)
PWK/PhJ	ENSLUMG00010020933	pseudogene	Chr17:12141526-12142109 (-)
SPRET/EiJ	ENSMSPG00010041286	pseudogene	Chr17:13491468-13492051 (-)
WSB/EiJ	ENSIUOG00005041541	pseudogene	Chr17:12937317-12937900 (-)

Homology

• Gene Tree
  Gm46610
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000116614 (Evidence)
• NCBI Gene
  108168360

Representative Sequences			Length	Strain/Species
genomic	108168360	NCBI Gene Model | MGI Sequence Detail	416	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;