Gm46576 Pseudogene Detail

Summary

• Symbol
  Gm46576
• Name
  predicted gene, 46576

• Feature Type
  pseudogene
• IDs
  MGI:5826213
  NCBI Gene: 108168319
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:66931889-66932037 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5826213	pseudogene	Chr17:66931886-66932082 (-)
129S1/SvImJ	ENSMUSG00200039328	pseudogene	Chr17:62272579-62272727 (-)
A/J	ENSMUSG00195019395	pseudogene	Chr17:63614896-63615044 (-)
AKR/J	ENSMUSG00220018497	pseudogene	Chr17:62695264-62695412 (-)
BALB/cJ	ENSMUSG00180020421	pseudogene	Chr17:63352213-63352361 (-)
C3H/HeJ	ENSMUSG00175030464	pseudogene	Chr17:62659721-62659869 (-)
C57BL/6NJ	ENSMUSG00215034017	pseudogene	Chr17:62320134-62320282 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026841	pseudogene	Chr17:63273515-63273663 (-)
CBA/J	ENSMUSG00210030459	pseudogene	Chr17:62459639-62459787 (-)
DBA/2J	ENSMUSG00185022983	pseudogene	Chr17:65304120-65304268 (-)
FVB/NJ	ENSMUSG00205017734	pseudogene	Chr17:63078695-63078843 (-)
JF1/MsJ	ENSUMUG00000039716	pseudogene	Chr17:64954825-64954973 (-)
LP/J	ENSMUSG00230017214	pseudogene	Chr17:66290817-66290965 (-)
NOD/ShiLtJ	ENSMUSG00190041791	pseudogene	Chr17:62438565-62438713 (-)
NZO/HlLtJ	ENSMUSG00225026169	pseudogene	Chr17:68567346-68567494 (-)
PWK/PhJ	ENSLUMG00010031095	pseudogene	Chr17:62256245-62256393 (-)
SPRET/EiJ	ENSMSPG00010017982	pseudogene	Chr17:62602391-62602539 (-)
WSB/EiJ	ENSIUOG00005031987	pseudogene	Chr17:63310461-63310609 (-)

Homology

• Gene Tree
  Gm46576
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000117186 (Evidence)
• NCBI Gene
  108168319

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117186	Ensembl Gene Model | MGI Sequence Detail	149	C57BL/6J
transcript	ENSMUST00000233257	Ensembl | MGI Sequence Detail	149	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;