Gm46501 Pseudogene Detail

Summary

• Symbol
  Gm46501
• Name
  predicted gene, 46501

• Feature Type
  pseudogene
• IDs
  MGI:5826138
  NCBI Gene: 108168220
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:82317728-82320776 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5826138	pseudogene	Chr15:82317726-82322855 (+)
129S1/SvImJ	ENSMUSG00200053818	pseudogene	Chr15:79431449-79434491 (+)
A/J	ENSMUSG00195051518	pseudogene	Chr15:79363111-79366151 (+)
AKR/J	ENSMUSG00220053351	pseudogene	Chr15:79406284-79409322 (+)
BALB/cJ	ENSMUSG00180053492	pseudogene	Chr15:79240039-79243079 (+)
C3H/HeJ	ENSMUSG00175053278	pseudogene	Chr15:79551011-79554049 (+)
C57BL/6NJ	ENSMUSG00215053068	pseudogene	Chr15:79335319-79338369 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047594	pseudogene	Chr15:78851913-78854953 (+)
CBA/J	ENSMUSG00210050087	pseudogene	Chr15:79326096-79329134 (+)
DBA/2J	ENSMUSG00185052124	pseudogene	Chr15:79349892-79352932 (+)
FVB/NJ	ENSMUSG00205051318	pseudogene	Chr15:79086443-79089483 (+)
JF1/MsJ	ENSUMUG00000056494	pseudogene	Chr15:78924869-78927918 (+)
LP/J	ENSMUSG00230046128	pseudogene	Chr15:82671816-82674854 (+)
NOD/ShiLtJ	ENSMUSG00190053397	pseudogene	Chr15:79343192-79346230 (+)
NZO/HlLtJ	ENSMUSG00225050384	pseudogene	Chr15:83010380-83013418 (+)
PWK/PhJ	ENSLUMG00010052235	pseudogene	Chr15:79135892-79138927 (+)
SPRET/EiJ	ENSMSPG00010051624	pseudogene	Chr15:80787649-80790694 (+)
WSB/EiJ	ENSIUOG00005050829	pseudogene	Chr15:79427789-79430823 (+)

Homology

• Gene Tree
  Gm46501
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  4
• Targeted
  4
• Genomic Mutations
  4 involving Gm46501
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000116325 (Evidence)
• NCBI Gene
  108168220

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116325	Ensembl Gene Model | MGI Sequence Detail	3049	C57BL/6J
transcript	ENSMUST00000230551	Ensembl | MGI Sequence Detail	683	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:241123 Scheer N, et al., Modeling human cytochrome P450 2D6 metabolism and drug-drug interaction by a novel panel of knockout and humanized mouse lines. Mol Pharmacol. 2012 Jan;81(1):63-72
• Latest
  J:286122 Henderson CJ, et al., An Extensively Humanized Mouse Model to Predict Pathways of Drug Disposition and Drug/Drug Interactions, and to Facilitate Design of Clinical Trials. Drug Metab Dispos. 2019 Jun;47(6):601-615